+Marker Data: SOL8381

Crop eggplant
Population LWF2_2022
Linkage Group E_11
Marker Type SNP
Map Position 42.5
Annotation
Source Name SEP04F14A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CAGCCTGGAGTCTATCCGAACATT
STS_primer_rev CGGGAGCAAATAAGGGTTGTATCA
amplicon_seq NTCATATATGGATGCTGTTCAGGCCTGGGGACACTATACTGATTGCTGCAGGAGGCAGCCATCGTGTGTCAAATATTCAGATTGAAAAGCCACTTTGCTTGGTAACTTCAAAATGTTAACCTGACATTACTTTACATACTTAATGCCTACAAATGCTGGATTTTTTGATGTTTCTGAGTCTTGTGAGATTTCTGATAGTTATTTCAAAGCTGGATATTTATGTGAAGTCACATTTTAGCTATTTCCACTCATAGAGGTCTTATTTAGTTTGTGGATGAAATGTTGAGCACATGAATACATATAATAGTTATGTAAACCCATTTGATCATGGGGTTGGGTGTGGTGATGACCATATTATATGGTGTAGCAGCAGCTCAGAATTGTTGGAATTGCAAATGTGAAGTATTAGAATTGCCGTGTCTTCGTGGTCTATTTTTTCATGACCTCATTTGCTACTAAAAAGAACCAAAGAAAGGATAGAATTGTAGCGGGGAAATGTGGTGATCAGAGGTGTAACCTGTGAGCTTGGCAAAAAATCTTTCTATATGTAGATATTGTCAAAATTTTGGATGTACTAATAACCTGGCACTTGGCTATGTTGTTGTTGTTGTTGTTTACAAATAACCTGGCACCCACAGTCACAATAATGATTATGGGGAGCACTGGTTGACACTCGGGCATATGAGCGCTTCATCTTTGACAACGGAGTTTGAATTCTATTTTGATGGAAGTCTTCATTTCTCTTCTTTTGGGTGCCAATGTTCCTTACCTTTTTCTTGGGGTCTTGTCTTTGTCATTTCTATTTCTCCTTTNGATGAAGAATACCATATAAAAGAAACTTNCCACTGTTTTTCAACTGCTTGTCTTTCATCTTTTCCCCTTNCTTTTCTTCTATAGTATTTCTCAATTTGTTTTTGTGCAATTCTTTTCCCCCTCCATCTGCTGATTTGAAGATACTCTATAAGAGTGAAGATGTTATTATATTCGAGATTCAGATGAAAAATATTTAAAGAAATTTCAAGGTTGACCGAATTTAATTAAAGAAAGAATATACAGAAATTGCAAACATCTTTATCCACCAATTATCTATTTCACCCTCCCCGGACCCCACTTGTGGGATTTCACTGGGTATGTNNNTATCGAACCACTTTCTTGATTTCTTGGCATCTCTCTTCTATTATTTGTCCACTAATTTGTTCTTTCCCTCCAAAACTAAAACATAATAAGTTGAACCAAAGGGCAGCGCGGTGCCTGAAGCATCCTGCATTCATGCAGGGTCTGGAGAGGCGTTGCACCTCAAGGTGGTGTAATGTAGGGAGCCTACCCTGTCACAAGCATCCATGATTGATTTCACGGCCCAAATTCATGATCTATAGACCACATATAAACAACTTTACTCTTGCTCCATGGCTCCCTTTCAACATGTTGAACCAAATGAACCCACAATTCCCCGAACTGACCCAATCTACACTCCTGTTAGTCGTTTTCTCAAGTAATTGTGCCTGCACAACCTTTAAATCCTAGGGGTCCGCCTTTGGTGGTGATGNTGGATCAATGTTAAACTGTTCAGAATTCAGATATGATGCACCTGAGACGAAAATTTTCTCCCTTGCCTTATAGGCATATACCTTGCAAGAGTAAAGTAAATACNN
SNP_position 1324
allele_1 C
allele_2 T
ASP_primer_S GCGGGCATCAATCATGGATGCTTGTGACAGGA
ASP_primer_L GCGGGCAGGGCGGCATCAATCATGGATGCTTGTGACATGG
Common_primer GCACCTCAAGGTGGTGTAATGTAGGG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro C C
WCGR112-8 C C

Population Linkage Group Position
LW2010 E_11 37.9
LWA2010 LWA_11 37.846
LWAE2012 E_11 41.665
LWF2_2022 E_11 42.5

DB Program Definition E-Value

EST Name Species Strain