+Marker Data: SOL7448

Crop eggplant
Population LWF2_2022
Linkage Group E_11
Marker Type SNP
Map Position 118.8
Annotation
Source Name SmFL38B17A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ACATTTTGATTGTCGTCTTCCGGT
STS_primer_rev TTGCTAACCGTACACGTGTCCATC
amplicon_seq NNNCTTCGATGCCTTCAGGTAATAATAGTAGTAGCAGTAGTAATTTTTCGTGAAACGACGTCGTTTAATGGAGTTTTTTCCGTTCATCAGCAGACACTTTCACTCGATTTAACTGATAAACGCGACGAGTTTAACACTCCGTACTTGAAATTTGCTGATTTTTTTTTTNGCTTTTACTGATAAACGCGACGATTTTAGTAATCTGGAGTTGAAATTTGATGGAGTTTTAGCTCAGTAGCAAAAAACGAACATGAAACGACATCGTTGTAGNAGTTCGGAGTTCAAATTTTGCTGATTATTTTATGTACTTTTACTAATAAATGCAACGATTTTAATACTCTGGAGTTTGAATTTGATGGATTTTTTGCTCATTATTAGTCGAAAACAATTTGATTACTGATAAAACGAGTTGTTTATGGTACTCCGGAGTGAATTTTTTTGGTTTTTTTACTGATAAACACGATGATTTTGAGCATGCGGTGTTGAGTTGAAATTTGATGGATGTTTAATGTTTTGCTCATCATCGAAAAGTTGGAATACTGAAGAAACTATTTCGTTTTAATTCTCCGAAGGTACAAATTTGCTAATATNTTTTTTTGCTTTCACTGATAAAGCGCAACATTTTGAAACTCCGTTGTGGAGATTTCATGGAGTTTTTCCAGTAACGCCGTTTTAGTTTTCCGGTGTTCAAATTCGCTGATTCTTCTTACTGTACAGGTTTGTCGCCGTTGCCGGTGCAGTTGTTGCATTATATTCACTCTTCGAAGTAGGAGCATCCGTTTGGGAGATTTCAAGAGGCGCTACTGTTTTCCCTGAAGTCGTTCAAGTTTGGTTCGATTTCGGCCACGATCAGGTTCATAAATCCTCTATTTCAATGGCGATTTCACCATTTTTCTGCAGAAATTTGTGTAACACGACGCCAATTTGGCATCATTTTGAGTGGAATTTCGATTTTTCGAGTTTTATAACTGAATATGAGAACAATTTGATACATAAAACATTGTTCACCTTTTTTCTGCAGAAAATTGTGAAACACGAAGCCAATTTTGCATCATTTTGAGTGGAATTTCGATTTTTCAAGTTTTATAACTGAATAAGAGAACAATGTGACACATGATACAAAACTCAAAGAATTATGATATATTAGTGTTN
SNP_position 889
allele_1 A
allele_2 G
ASP_primer_S GCGGGCCCTCTATTTCAATGGCGATTTCACCA
ASP_primer_L GCGGGCAGGGCGGCCCTCTATTTCAATGGCGATTTCAACG
Common_primer CCAAATTGGCGTCGTGTTACACAAAT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 G G

Population Linkage Group Position
LW2010 E_11 87.3
LWA2010 LWA_11 88.171
LWAE2012 E_11 83.936
LWF2_2022 E_11 118.8

DB Program Definition E-Value

EST Name Species Strain