+Marker Data: SOL8607

Crop eggplant
Population LWF2_2022
Linkage Group E_09
Marker Type SNP
Map Position 60.1
Annotation
Source Name PER03I10F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TGCTGTTTTACGACATGTCCGATT
STS_primer_rev AACAGCCCTGACAACATCTCCAAT
amplicon_seq NCACTAAAATATCTGACATTTTGAAGGGCAAAGGCAAAGGAGCTGATGGTTCCTGGCTCTGGTGCACTACAGATGACAGTGTTTATGATGCTGTGAAATCGGTTAGTAACTTAATGCCAATGCATCTGTACAGTGTCTTTTCATCTGAATGTTGACAGGATGTTGATTTTGCATTTTATCTACTTATGTGAGAGCCAACCAAACTTCTTACTTATGCTAACAAGTGAAACTTTTATCCTTTATGTGACTGATTCTTTGTGTCTATGCCAGATGACACAGCACAATGTAGGAGCCTTGGTGGTTGTGAAATCTGGGGAAAATAAGTCAATTGCTGGCATCATTACTGAGAGAGGTAAACACCTATCTTATAAGGCACAACTGACTATGATGCTTTACCTGTCTGTGATGCCTATTTAATTTCTTGTACCAGTATTGGTTTTGTGGGATTCCACTGGGTATGTTGTTGTTGTTGTTGTTACCAGTATTGGTTCTTGAACTTGTTCGACAATCATTTCTGTAAATCTAGCTTTATGTTACAAGAAATGTTGCATCCTCTGGACACTCTCAAACAGGAACTATATACATGTCAGGTCCTTTTATTACTGATTTTTAGCTATTATCATGTTCAGTCATAAAATTCCCCTTGTTTGTAACATTATTGTGATATCATCACTGACCTTCCTTACTAATGTACTATTTCATATGAAGTTTATGGATATCTATGTGAATGTAAGCAAAGAAGAATGTAAAATCTGGGAAGGTTCTCGATATTTACGTGAAATTTAAGAGTCTCTATGTGACGATGTGAATGAAATCTGTAAAACATAAGTTTTCTTGTGTAGCATTGACATGAATGTCAATTTGGGGAAGGCTACTAAAATTATCTCAGTGTCATCATTGTCTGGNTTCTTTCACTTTGTAGTTGTTTTTCACGTGAGGAATTGCATCATATGTGAATAATGCAACGGAGAGCCCGTTAGGATTGGCTTATTTTTGATGCTTTTAAGCCGAAATAACTTTTAAGTAGTTTGTATTGTTTGGGAAAAAAAAGTGTTTTTAAGCCAAAATAACAAAAATAAGTGAAAAATTGTAAGTTAGAAATTCTAACATGATTTTTGGTTTATAAGCCATATGTTATAAGCCCATCTAAACATGCTCTGAGTTAACCTACAGCCTATAGCCAATGTTTTCTAGTTCCATTTTTGGTCCCGAGTTTTATAAGTTGACTTTACTAGTTGTAAATACATAAAATTTCAGACAGCTAGACATGCAAAAACTACTGCAGTTCTGATTATTCTTCCGTCTCTTCAACCACTTCCCCTTCTAATTAATTTTCTCCAACCAGATTATCTTCGGAAAATCATAGTACAGGGAAGATCATCCAAATCAACAAAGGTTGGGGACATCATGACAGAGGAGGTAAAACTCTAAAGCTGCTTTTCATGAGAAAAAGAAAATAAGAAATAAAAAGTCTAGCATGTAGACTTTCCTCCCAATCAGACCTTTCTATTTGGTATTCAAAATACAATATATTATTAACACAATGACTAATCATTGTATGTGTGTTTGCAGAACAAGCTTATCACTGTCACACCTGAAACCAAAGTTCTGAAAGCAATGCAACTGATGACAGGTGCTATTTCCTAGAACTTTCTCGGAACCTGCTCCCTTTCTAGATTTCTCTCATAAGCTCATGT
SNP_position 1489
allele_1 C
allele_2 G
ASP_primer_S GCGGGCACCAAATAGAAAGGTCTGATTGGGAGC
ASP_primer_L GCGGGCAGGGCGGCACCAAATAGAAAGGTCTGATTGGGAGG
Common_primer TGCTTTTCATGAGAAAAAGAAAATAAGAA
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 G G
LS1934 C C
Nakate Shinkuro G G
WCGR112-8 G G
Population Linkage Group Position
LW2010 E_09 57.3
LWA2010 LWA_09 59.158
LWAE2012 E_09 43.926
LWF2_2022 E_09 60.1
DB Program Definition E-Value
EST Name Species Strain