+Marker Data: SOL8454

Crop eggplant
Population LWF2_2022
Linkage Group E_09
Marker Type SNP
Map Position 91.7
Annotation
Source Name SEP06C01A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GAGTGTGTGTTCGGAATGGTCG
STS_primer_rev TGCCAAGTCAACAGCTTCTTCAAC
amplicon_seq NNNNNNNNNNNNTGGTGGCGGATCCTCCGCCGTGCNCAGTATACTGGTTCANNAATCCAATGAAGACAANGTCATGATTCTCGATTCTCATAAACTTATGGGAGCAAGCGGTGAATCCGGATACAGGTTTGTTGGTTTTTTTATTTANATTTAATAGTTGTGTTGTTCGATCTCTATGAACTTTTATTTGTATGTTGAATTTTTCGGTGAATTTACAGAGCTCAGTTCACGGAGTATGTGCAGAAAAATGTGGCTTTGTATCAGTTTCGTAATGGTATTCCGTTGACTACAGCTGCTGCAGCTAATTTCACAAGAGGCGAGCTTGCTACAGCTTTGCGTAAGGTATTGGTTTTANATTCTAGGGTTTTGATTTTGTAGTTACATGATGATTTGAGCATNTGTTTTTTNNTCTTGGGTGCAATTGTAGGGTTTTAAATTTTAGAAGTCCCAAAATGTCAAATTAGGGTTTGATACTTCAATCAGACAATTAATTAATTAAGGATCAAGTAGACAATAATCAAGTATATATGAACTCCATCTAGTTGAGGTTGGCTGAATGAATCCTTTGAAATAATTCTTTTGTATTCAGGCTCATTTCATTTCATGATTCCGTAAAGCTAGAAAAGTTTGAAAGGCTTTTGCACTTTGTATGCTGATATACATCTCTGTGACCTGACTAAGAAAGACTGCTGATTTGTAGAGTACTAGATGAAGTGCAAATCAGTTACTTGAGCAGTTGTAAAAAGTAATTAAGCCTCACATGAGCAGGAATAAGGTCTGCGTACGACCCACTCTTCCCATACAACACTTGTGGGATCTCATTTGATATGTTGTTGATGTATGCATCTTCCTCTAGTTTTCTATTGACATTGCATGGATTANGAATAAGAAAATTGGAGTGAGAAAAGTAAGTTTGGCCTATGCTATTGTTCCTAAGTATTCTGCTCTATCTAATAGTGAGTCACTGTTGTTGTGTCTAAGCCATGGCATTCTGCATATTTNATCCAGGCATGACATACTGNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTCATTCATTAGGGGGAATCTGGGAACCNACAATTNCTAGCAAAATACACACCACTACGAACTATCATGTATATGTGCACCACTTAAATAAGTAGTACTTAAGCAAAGGAGAATAGTAGATTGATAAATGTTGCAAGAAAATTCATTCTCTACCTACTCCCGATACATTAGAGCTCATGATGCTTTATGGATAGCAAACATAGTAATATATTTTCCTGCTTATGGCCTTGGGATACAAAATACAGAGTCATGCACCTTTAAATGCTTCAGCATTATCTAGAGTTTCGGCAAGTTGATGAATAGACACAAAGTTCATATGCTTCAAGGGAAGAAATGTTTAAGTGCACCCTATTTGTTGAACTTCTAGTCAAAGTTTCTAGAATGCTCAAGCTAAGATACACCTATTGTTTATAAATCAACAATGATACAAACAACGCTTGTAAGGAATCCTTTTAAAACCAATAAATATAGGTCAGAGTGCTATCCACACCAGAATATACTTAATGGGCAAGTGGAAATAATAATGACATTTGAGGTTAGGTTGACTTGAGAAGAGGATAAAGAGGAGAGCTTTTGGTTGAAGATACACTTCTGTTTAACCATAACATTTGGAGCTTTTTAAACAAAATGTAGAGTGCGGCTGCCCTTTTTGTCCTTACGATTTACTTTGAATTCCTTGTTTTGATTACTGGTTTCGGAGAGGAGGATGTTGTGGAAAGATAACTTGCAGTTAGTTTTATCCTTGGAAAAATAATTGTTCTTTGAAGGGTTAGTTCTGAAAAAATTTGATGTGCAATTTGGTTTTCTGGTACGCATTTGTTAACTAAAATGATTGTTTTTGTAGAATCCGTACATGGTGAACATTATCCTGGCTGGATATGACAAGGAGACAGGCCCTTCTCTATATTACATTGATTACATTGCTTCTCTTCACAAGGTGGATAAGGCAGCATTCGGTTATGGCTCCTATTTTTCTCTCGCCATGATGGNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 1700
allele_1 T
allele_2 C
ASP_primer_S GCGGGCGGCAGCCGCACTCTACATTTTGTTTAA
ASP_primer_L GCGGGCAGGGCGGCGGCAGCCGCACTCTACATTTTGTTGAG
Common_primer GGAGAGCTTTTGGTTGAAGATACACTTCTG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro C C
WCGR112-8 C C

Population Linkage Group Position
LW2010 E_09 76.9
LWA2010 LWA_09 81.059
LWAE2012 E_09 65.191
LWF2_2022 E_09 91.7

DB Program Definition E-Value

EST Name Species Strain