+Marker Data: SOL4040

Crop eggplant
Population LWF2_2022
Linkage Group E_09
Marker Type SNP
Map Position 107.2
Annotation
Source Name CAL03I07A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GGAAGGGTTCTCTTCGTATCCGTC
STS_primer_rev GGGAAGCAACGGCCTGATGTAT
amplicon_seq CCCAAGTGAGGTAATTCCAAGTCCTATCAAAAACCTGTTACACTAATTCATCCACAACTTAGTCAATCCAACACTGATAACAAATCAACCGAACCAAGTATAAAAATGGTCAGGATCTAATCCTCAATGACAGAGTGTTCAAGGCATAGCAATAACAACCTAAAGATCCCAAATTTGATTCTCAATTACAACTCGGTTTATTTTTTTTAGTTCTTATTTTTGCCAAAAAGAACACTCAGTTCCTCAATGTTAACCCATACTAGCACTCGTCTTGTATGCTACAAGCACACAAAAAAACTGAACTTTGAGCTGTAATCCAAAAAAACCAACAATTTTTTAACACCTCACCAAAATACATGAGCAGATCTGCATGCTGTCCAGTACAAGCTAACCAAAAATATTGAAAATTGCACCTTTAACCATATAAATATAGTTCATATTTTGTAAAATATATATACGTATATATTAGGTCAACTCGTATTGTCAATTATATACAAAATTGAGATATACAGGGGAAGCAACGGCCTGATGTATCAGCAGAAGAAGAACTCCAATAGTGCTGCCGAAGATGAATAAAAGCAAAATAGGGCGTTTATCTCTATATGTGATATTTCAAATCCAGTGTGTGTTAACACATGCTTTGACAAAACATTGAACTTTGGTCTTAATGCTTTTGCTGATGCTGACCACCATCAGCCCCAAATTCACTGAACTCATGATAAGTGGAGAGAATGAAGACGGATACGAAGAGAACCCTTCCTGTTTCATCTGTAAATTACATATCATGTTAAGTTAGGTAGAACTAGAAAGAAGGCCGAATAAGCTGAGCCAAAGTGATACCTCGACATGTGGTACTTCAAATCCAGTGTGGGTTAACACATGCTTTGACAAAACATTGAACTTTGGTCTTAATGCCTTTGCTGCTGGCCCCCCATCAGTCCCAAATTCACTGAACCTATAAACCATAGCAGTTGATGAATGATGCCGGTTTATGAAATAAAATAAAAAGCAAAGAAACCATAAATAATTTTGTAATTCTCTCTATCCATTACAAAAGGTGTTAACACAAATAAGAAACAGAAGGCATGTCAAAATTCTTCTTTTTCTTGATAAGCATATGCATATTGAAAATATGATCAGTTGGTAGACACATCTCAACGTTGCAGTCCAAGACAGCCAAATAGTTTTACTTTTCACAAGTGCTTCAGCCCAACTCATCCAATGTATATATATCTATCAATGAACTAAGCATAGAAGCCCAGTAGATAGGAGTACCATGTGGTTACGGTACAC
SNP_position 1175
allele_1 A
allele_2 T
ASP_primer_S GCGGGCACATCTCAACGTTGCAGTCCAAGACT
ASP_primer_L GCGGGCAGGGCGGCACATCTCAACGTTGCAGTCCAAGACA
Common_primer GAGTTGGGCTGAAGCACTTGTGAAAA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 A A
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_09 91.4
LWA2010 LWA_09 96.16
LWAE2012 E_09 78.213
LWF2_2022 E_09 107.2

DB Program Definition E-Value

EST Name Species Strain