+Marker Data: SOL8193

Crop eggplant
Population LWF2_2022
Linkage Group E_04
Marker Type SNP
Map Position 102.1
Annotation
Source Name CHX01L17F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GGATCTCTTCTGCTATTCGGGTCA
STS_primer_rev CACAAGAACAAACAATGGCTTATCTCC
amplicon_seq CCGGTACCACTTCTTCTGCTTCTTCGNTTCGTCGAACGATTCTGATAATTGTAACAGTAGAACTGTTTTTTGTTCCTGTTTTGTGTTGACGAAGTGAGTATTTTTCAGGGATTATGTTTCAGGATATAACGACTTTGCTTCTTGATACTAAGGCGTTTAAGGACACTGTTGACTTGTTTGTTGAGAGATACAAGGACAAAAACATCACTGTGGTTGCAGGTTATTCCTTTGTTTCTGAATTTGTAATGCTAAACTGTTCCATTTTGAAGCTAGTTCTTTAAAGGATAAAATATTTCAATTTTTAGAAGCTGAGATTTCACGATCTTGGAGTTATGCTATGAATAGTACATCAGCTGATATTTTATGTTGCCAGGCTCTCTATCCATCAGCATTATGTGTAGCTTAAAAAGGAAAACATGGTCGTTTGGTAGAGTGTACAAGAATAGCAGTGAATATGGTGTATTAGTATAGAGTGTATAAGAATAGTAGTGAATCGGTGTATTAGTAANGATGAGATAAGTAATACTGGGGATTAGTTATGTTGTAACTATGCAAGATCTGTTAGAAAAACAAAATGTTGCTATCTAGAGTTAGATTTATGATACTTCAAGCATCTAACTCAACGAAATAGCCCTAGGTAATTATGAACTCTTTTCTAAACACTTTAGACAANGTGTTACAACTGTGTAACTTGACAAGATACTACAAGCTTCAGCTTTGTAAGCTTTTATATAAAAATAGAAAAATGAAAAAGAGCTTCATTTTCTTCTGACCAACACATCATCCTTTCTGTAGCTTTACTAAATTATGATACCTAATTTTGCGAGTTACAGAAGTGCAAACTCATGTGTTTAGTTTAACGCTTCATATAAGTACTTAAGACAAGCATGATGACCTGATTTGATCGTCTTACAAAATAATGTGGATGGAGAACTCCTTTTTTGGGAGATTTTGTTTGCTTATGGGATTTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNGTTCAGTCAATAAAATCATTGGGTCTTATATGACTATGTGCTTGCCTGTATAAAGGTCGAAAGTGAAAATNGATCATTTCCGTTGTTNATTACCTCACCTCCATGCTTCATGATGAAACACAATGAGATNATTTAGGAATGTTAAGAGTTCTTTTGGCATTGGAGGCACAANATTTCACCCTGCTGCTTTTCCCATTTTCTCAGGGGAGGTTATTTCAGAAGAGTATTCTTTGGAATATGGAACAGACAAGATGGAGATGCATGTAGGTGCTGTGCAAGCCAGTGACCGTGCACTTGTGGTAGATGATCTTATTGCGACTGGAGGGACCCTAACTGCTGCGATTAGGCTTCTTGGTACTTTACCTATATTCAGTTCTATCCTTCTGAAAGATATCCTAGTTGGTTGAAATGCCGATTGTCAGAAAAAAGATGAGTAAAATCATAAGCTATCAGTTAGATAACGACTAGTGAGAAACCTTTATGTATTTAGATGTTTGACCACGTCTTTTGCTCCCAACAATTTGAAAAGACAACACTTTTGGAACTTCGTGGACAGGACCTTGTTTGAGTTGTGACATTGGAGTCTCAATTTCTTAAATCTCTTTATCTTTCTTTTTCTTCACAGAGCGTGTGGGAGCTGTGGTGGTCGAGTGTGCATGTGTAATTGAGTTGCCAGAATTGAAGGTATGCCAGCATTTCTATTGTATAATCAGCAAAAATTCTTGATTTTCACACCCCATTGCTGCATTTCTGACCACGCTATTTTGTAAACAGTCTGATGGGCTTGGGAGTGTATATCCTCTATTTATCTTTGATTACAGCTAAATCTTGTATCCCAGATTATTTTCTTTCCTGTCTACTAAGAGGTGGCTGATATAGTTTTCTTCCCCGGCTTATATTATTCCTGTTCCAATGTGTTATACTAGTGNCTTATGATTTATTTATATTTTTCCCTCATTAATACTTTTCTGTTTACATTCGTTTNNNNNNN
SNP_position 105
allele_1 T
allele_2 G
ASP_primer_S GCGGGCCGTTATATCCTGAAACATAATCCCTGA
ASP_primer_L GCGGGCAGGGCGGCCGTTATATCCTGAAACATAATCCCGGC
Common_primer TGTTCCTGTTTTGTGTTGACGAAGTGA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 G G
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_04 77.0
LWA2010 LWA_04 80.753
LWAE2012 E_04 79.117
LWF2_2022 E_04 102.1

DB Program Definition E-Value

EST Name Species Strain