+Marker Data: SOL7452

Crop eggplant
Population LWF2_2022
Linkage Group E_04
Marker Type SNP
Map Position 45.3
Annotation
Source Name SmFL07M18A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CCATCCTGGTTGATGAAACATCTG
STS_primer_rev GCTGAGGCCTTCCAAGAGAAGTAA
amplicon_seq NNNGTCTAGTCGTGATGATGACTGATTGTACTTGTTCATAAATCCCTGGTTGTGACATCCTTATGGCTTCATCTAGATTGATAGATTTATAGTTTTTACTTGTTTCTAGTAATCAGTCAATAGGAATTTGCTTAGAAGTTAAGGTTGTACAAAGATGATAGTAGTGTTCAGTTTTGTGCTATGGAGAGTAAGTCTCCAAATATCTCAAATACTGTCATAAGTTACACTACATCAATAAGTTCATTCAAGGTCATGGTTGTTGGTCTTAAATGCTTCTCCTCTGTACTGTAGTACTGTGTATCTTGTTTCCTGTTTTCTTGTTTCTCTATTAGTAGTAAGCTTTGTGACTATTGGTTTGTTTTGGAATACATGGCAATTTCAATAAATTACTCACTTTTCCTTGTATATGCTTTAACACTTGTCATAGTACCCATCTTCATTCCCTCTCCTCTATATGTGTAATTCAGGTGCAAAAGATTCAGACTTTGACACCAAACATTGGAGTAGTTTACAGGTGAGATCCTTTATCTTTATTGGCCCCAGTTATCCTCATCACATTCCAGGATACAAGGGTGTGTGGTGAACATGGCTAGAGTTGTATGTAAAACTGTCTTCAGATTGTGAATGGGCATCCTTTATGGTGGGTGAGCTCCTCTGTTAGTTTAGTTGGTTGACCTAGTTTATGGTTTCTTCTCTCACATGTTTAAGGTCAACCATGAAATAACTAGAGGTTCATTTCAATAGAATAAGTTTTTGTGTGCAACTATACAGCAAATTGAGGTGGCTTATTGGATATTATGCACATTCAGTGAATCACACATACAATTGATAGATTATGGAATTGGGTAGCAGAATTTCCACGAAACGAANTGGGCAAGTTCAGTTAGTTATCCAAACTCAGTATTATTTATAACAAGCAGCATCANGTTCAGTAATAGCCACATCTTACCTATCTTCGCTTGNCAGTTAGATGGANGTCAGCTTAACATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTAGNCTTNGATAATTTTCCNTATNAAGTTGTGTGGTTGGCCTCTGAGTAGTATGGTCAATCATCACTATGATGTATTNACTGGTAAAAGTCNAAGGAAGTCAGCNTGCTCGGCACCGTTAAAATTCTTGAAGCACATACTTTGACAACATTTGTTAGATGTAGGAGCTTGGGACTAATATGGTGATACATGTTTGCCTCAAATGGTATTAATGAATGGTAGAAAAAAGGTCCATAGTGTGTGTAATTAACCAATTCCTTGACATATACATATATTGAAAGCATCCTTGCTGTCTTTTTCTAGTGGAATCTTGTTTACACACTTGTAGTGGAAGGCATGCGAACTGTAAAACTGTATGTTGGTGTTGGTAGTAAAGAATTTGGAAAAGAAGCAGCAGCTTCACATTTTATGTGAATATCATATGAATAGGCAAGAGAGTGAAAATACTACCATATTTTTATCTTCTCGTGTTCTCGGTTCTCTTTGTTCTTCCTTAGTATTTATTCCTCTTCTCCATTCTCTCTTTTGTTTGGGTTCAAAGTTTCAGTTAAAAAACACGTGCTCATATTATGAAACTAAACTAGATTTCCTTGGTCTTTATCAGTTTGTGATTCTTAATGTCAGATACACAAGGAGTCTTCCTGTGTAGTCTTCGTCTTGCAATCTTTTAATTCTATCCATTCCTTTTTGCTCTATATGCAGTGGTGTAAGGCCATTTGGTGTTTCACTCTTGGTTGCGGGTTATGATGACAAGGGTCCGCAACTATATCAGGTATATTATCTAGCTCTTGTTCTGATGTGTTCACTTGTCTCTTTATGTNCTTTTACTGTTATTATGGTGAATATGAGCTACTTGCCTAATGTTGGTTGGCCTATACATTCATTCTCACGCTTCACCTGTTACTTCTCCCACTTGATTTTGGTAGAACTCCTCTTTATATACTTGTTTAACCTATGAGGGCACCTGACTTGTGATGCTATAACCGTATTTGATATTCAGTTNNNNNN
SNP_position 1371
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTTACACACTTGTAGTGGAAGGCATGCA
ASP_primer_L GCGGGCAGGGCGGCTTACACACTTGTAGTGGAAGGCATTCG
Common_primer TCCAAATTCTTTACTACCAACACCAACA
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 G G
Population Linkage Group Position
LW2010 E_04 27.1
LWA2010 LWA_04 29.035
LWAE2012 E_04 28.224
LWF2_2022 E_04 45.3
DB Program Definition E-Value
EST Name Species Strain