+Marker Data: SOL4018

Crop eggplant
Population LWF2_2022
Linkage Group E_04
Marker Type SNP
Map Position 94.8
Annotation
Source Name SHT04F06W
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ATGAATCATGGCTCACAAGGAACC
STS_primer_rev TGGAATAAGGAGAGCTTCTCCAGG
amplicon_seq GAAACTCCACAGAGCGTTTCATTTGCTGAGTTGACCAGCTGTGAGTACTAAATTCTTGGGATCAAATTTTACTTTCTTCTTTCTGATCTCAGCCATGAATGACACTAGTACCTTCAAAACAAAATATAATGTAGCTTAAAACAAGATATTTTTCATCCAACAACACCAAGATACTTAGTATTAGCGGCGGAGCTAAGATTTTCTATAAAGAAATTTTAAAATTTTAAGAAGTAGACACACGAACTGATCGAAGGAGGTTCGACATCTATTATACATAGATAAAGGGTTCAGATGAACCCCTAAATACTTATGTGGCTCTGCCACTGCCTAGTATATATATGAACCCAACAGTGGAGTCGTCTGGAAAGATAAAATATACACAAACCTTATCCTACCTTTTGTGGGGTACTAGTGAGGTTGTTATTTCTGAAAGATGCTCGACTCGAAAGAAAAAAAGAATGTATATATATATATATATATATATATATATATATATATATATAAGAAAGAAAAGGAAGAAATTAAGTTACATTCTTGAAAGCTTGCAATCCATGATAATCTTGGAAAAGAGCCAAGTCTCTGAACATGTATCCTCTTTTTTCTCTAAAGAGAAATATATCGTGTGTCCGTGAGAGAAAAGATAAAAAAAAA
SNP_position 392
allele_1 C
allele_2 T
ASP_primer_S GCGGGCACCTCACTAGTACCCCACAAAAGGTAA
ASP_primer_L GCGGGCAGGGCGGCACCTCACTAGTACCCCACAAAAGGGAG
Common_primer CCAACAGTGGAGTCGTCTGGAAAGATA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_04 71.2
LWA2010 LWA_04 74.377
LWAE2012 E_04 73.239
LWF2_2022 E_04 94.8

DB Program Definition E-Value

EST Name Species Strain