+Marker Data: SOL8460

Crop eggplant
Population LWF2_2022
Linkage Group E_02
Marker Type SNP
Map Position 50.1
Annotation
Source Name SEP07C06A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CTGCCGTATGATGCTGATGTATCC
STS_primer_rev GCATGCGCTCTTCCATCTCCT
amplicon_seq NCGATCTTTGATAAAAATTCTAGCCGATACTTTGTCTATGTAGTTTACCGTATCTTTCTATGCAGATGCACCTGCNCAGTTGCATATAATTAAAGAAGTAAAAAAACAAAAGAGAAATGAATTTTAAGATTATTCTTTTGTTAAGTAGAATTCTATTCAACGCAGTATGTTTCAANATTTCCTGTTGCTAATTTGTCTATAAAGATCTTCTCCCTGCTAAATAAAGAGTGTATTTATCTTTATCCTAAACAGATACAGACACACAGAGAAAGGATGTTGATTTAGTTAGTCCTTTTGTTCAACCAGATCTTCATAATGAAATTTCCATATTAGGTAGCATTGAAATGGCAACACATTAAAAGACAACATAACGTCAAATATGTTCAAGCAGAGTATGAAAGATGTGTCTTGTACGCATTGGTTGGTGTGGATAAGTTTTTTACTATGTTTCTTTAGGGTGCTACAAATCAATTAAAATCACTATGTTAAGCCTTCTATGCAAATAATAAGATTTATGGAGATTAGGATGATTGGAATTGAAGGAGATAAAAGGGGATAATTGACACAATAAACATGTAGTTATTGATGCTTCAGCCAATTCTTGAGTCATTGAAACTCCGGCAGATGGGTTGGTTTGTTTCTGTTTAAGCTGCTCTTGTCTGGTTCTTCCTTCTCCACTTATAGTCTGAACCTGGTGGAAGTTTGATAGAGAAGTTATGTTGGAACTTGGAAGGGAAGTTTGAATGATATTCTTGTATAGAGATTTATGATCTTGAGCTTGTGATATCAGCATCACCTGCCATTTAAATCCGAAACTTTTTTGAATTTTTAGCTGCAAAAGTTTAGAAGTTATTGATATCACAGATTGTGGCAAAAAATAAAGATGGGTGGGTGAGTAAGGAAGCAAAATCAGGTCTTTTTAGTTATTAGGCTATTTGCTTCCGTACCTGATTACAACGACGACAACATACCTAGTGTAATTGAATAAGTGAGGTATGGAGAAGGTGGTGTGTACACACCTCTACATCTTGAAGGTTAGAGAGGTGGTTTTTGATATACCCTTGACTTAAGTAAAACATATCAAAATCAGCAACAGGAAATACAGTAGTGAAGCCATGTAGAAAATAATGGAGAAAAAAGCCGTGGCAACAACAAGTAATAAGATAAACAAAGGAAAGAATAGATAATAATTGAATCAAAGAATAAGATACAGTAGGAGAGTAANNNNN
SNP_position 367
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTGAAATGGCAACACATTAAAAGACAAT
ASP_primer_L GCGGGCAGGGCGGCTGAAATGGCAACACATTAAAAGACCAC
Common_primer TGCGTACAAGACACATCTTTCATACTCTGC
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 C C
Nakate Shinkuro C C
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_02 30.0
LWA2010 LWA_02 31.107
LWAE2012 E_02 31.923
LWF2_2022 E_02 50.1

DB Program Definition E-Value

EST Name Species Strain