+Marker Data: gg680_1218

Crop eggplant
Population LWAE2012
Linkage Group E_09
Marker Type SNP
Map Position 2.983
Annotation
Source Name FKO03-01.4982.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c680
454-Contig_seq (unpadded) CAATAACATATCCAGTGTAGACCCACAAATGGGGTTTGTGGAGGGTAGTGTGTGCGCAACCTTACCCCCTACCTTGTGAAGTTAATGGACCCTCAGAAATAACATAGTTTTTTTATTGNAACCAAAGCTGTGTGTTCTTGTCGAGCTATAAGCTGTCTGTTTCTTGTTTCTATCAGAATTAGNNCACATTGTGTCATGTTCCATTCAAACTTATTGAATTTGCAATACTTATGCCCTGGCTTCGTTTTGCAGACAGATGCGTTCTTCAAAACAAGTGTGCCTGATGTGTACGCTGTAGGTGATGTTGCCACTTTTCCTATGAAAATGTACAATGATATCAGAAGAGTTGAACATGTTGATCATTCTCGCNAAATCTGCTGAGCAGGCTGTCAAGGTATGTGACACCTCCTTNGATGTTGTCCAGAGTGAATATGAAAGTGTGATATTGTCATCCTGCGTATAATGTGATNACTCTTTACTGGNTCAACTATTACTCTGCATTCATTAGTTGTAATGAAAACTGAAGGTTTGAAGGACACAATACACGCAGATTAGGGTGGCCAATACTGAAAANCTCTCTCCGCTCTACGTGCTTGCTGATTATTTATGTCCTGGCACGAGTACAAATTTGTGACAATACTATGTTNAAATTACACTCTCACAGGGCGTCTTTTGCCAACACTGTGTGACTTCTTAGAACAGCTTTTTGCAGTTTGCTAATGATTTCTACTCTGTCAATCGACTTAATCAAATGCAGTAACAAATTCCCAAACTCCATATCTTTTTATGAAGTNAAAATGTTAATGTTAAATTGTTGCTGGTGCAGGCAATATTTGCCAGTGAGCAAGGGAAGTCTGTCGATGAATATGACTACCTTCCATATTTCTACTCCCGTGCCTTCGATTTGTCTTGGCAATTCTACGGTGATAACGTGGGTGAAACAGTGCTCTTTGGGGATGCTGATCCCAAATCTGCAACTCACAAGTTTGGACAATACTGGATCAAAGACGGAAAGATTGCTGGTGCATTCCTCGAGAGTGGCTCACNCTGANAGAGAACAAGGCAATTGCTAAAGTTGCAAAAGTTCANACCCCCTGCTACCTTGGAGCAATTGGCACAGGAGGGCATCAGCTTTGCCTCTAAGATCTAATTGTTATACCTATATTGGCCTAAAAACNAGCTCTTTGAAGTTTCTGCCTTATTTACAATGTGGTTGATATGTTAAAATATGATATTATTCATCTGAGTTTATTCGCTGAAGATCACTCTGTAAGGCATATATATACATTACATTAAGGAGTGATATCTCTGTAAGTAATGGAATGTTGGATGCAATGGTTTGTGAAACTCTTTCACCCGTTCAATTTATGTGGCACTATTTCCTCATTAGTCTGTCCAAAAAAAGGGNTCCCNCTTAATGGCNATGCNTTTTATAGAAACCAAAGTACATGTATTCAAAACATCCTAAAGATTAATGTAAANACTAATGTTTNACTAACCTATAGATAATATCTTTATTCATTGTCCCAATTTTATAAAGGCAAGAAAAGCTGGTTGTATCTCAACATGAAGTTGAAGTGTCGACTGCCATGCAGATTAATCACCCTAACAACAAACGAGCCCTTGCAACGATATAGTCTTGGGTTATCCTCAACAGCAGCAATCAAACCATCCTCAGCCTAATGTTGCTTCTCCTCTGCCAATATGTTGGGCAGCATTTCAGAGCTTTATACGACCAACTTTTTCTTCATCTAGTCCAGGAACTACAACATCTTCCCTCATCATGCAATAGTAATCATCTC
SNP_position 1218
sequence_for_GGdesign CCTATATTGGCCTAAAAAC-AGCTCTTTGAAGTTTCTGCCTTATTTACAATGTGGTTGAT[A/G]TGTTAAAATATGATATTATTCATCTGAGTTTATTCGCTGAAGATCACTCTGTAAGGCATA
GGdesign_Final_Score 0.656
Ilmn_Id 680_1218-0_T_F_1967851980
allele_1 A
allele_2 G
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_09 2.983
DB Program Definition E-Value
EST Name Species Strain