+Marker Data: gg21259_1643

Crop eggplant
Population LWAE2012
Linkage Group E_09
Marker Type SNP
Map Position 22.461
Annotation
Source Name FKO03-01.22445.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c21259
454-Contig_seq (unpadded) CTATCATGGACATATTTTAATTTGAACTCCGTGATAAGTCTTCATCATGGACTAGATGCGGACTTATGTATTTTATTGCCAGTTATTTATATCTCGGTCCAAGGCTTTTGGGTCTTGGCCCAAGTATTCCCAAACGTGTTTTTACCTGTAGTTAGCCTTATTTCACCGTTATATAATCCTAAACATTCCCCAATACTCACTCAAACACTTAGTCATATTTTCACTCCCAAAATTCACGTCTCAAACCCTCATCCCAAGCTAAGGTTCTCCTTCAAGGTTCTTCTTCATGCTTCAAGTCTCCATCTTCAATCTTCACCGAGTTTATCTCTAAGCTAAGGTATGTGGGTTTNTTNCTCCCATGATCTTCAGGCCTCTTTTTACNTAAATTGCATGATTTAAAGTAGATTTACAAATGAGTGTTGCTTATTATGAAATTCGCTGCACACTATATTAAAGCTATGTAAAGTTGTGACTGTTTTGCTATAGTTTGAGTTATAAATCTTGGATTTATTGTAAGATTTGATGAGGGGTTTTTATGCATATTGCATGAGAGTTTTGCAAGGTGTTGATTGATGGCTTTACAATGGATTTTCTTGCATGATTTCATCTCTATATTTTATGGTTTTATACTAGCATTACATAGGGTCTGCTTGGAACAAGTGGAGATTGGCTTCTGGAGTACTGTGTGATAAGAAGATACCGCCCAAACTTNAAGGTAAGTTTTANTAGAGCGGTGGTTAGACCTTCTTTGTTGTATGGGGCGGAGTGTTGGCCCATCAAAAAGGCGCATGTTCAGAAGATGCACGTTGCAGAGATGCGGATGTTGAGATGGATGTGTGGGCAAAGCAGGAGCGACAAGGTCAGAAATGAGACCTTTCGGGAGAAGTTAGAGGTGGCACCGGTGGCTGAGACGATGAGAGAGGCGAGACTGCGTTGGTTTGGACATGTGAGGAGGAGGAGTGTCGATGCTCCTGTTAGGAGATGCGAGAGGATAGTTTTAGGAGATTCTCGAAGGGNGTAGAGGTAGACCGAAAAAGTACTGGGGAGAAGTGATTAGACATGATATGGAGAGTCTTAGTCTCACCGAGGACATGACAGTGGATAGGAAGATGTGGAGGTCGCGAATTAAAGTAGTAGGTTAANATGGATAGTTGGGTTAGGTAGACNGGGGGGCGTATAGGGTTGTATTATTTTGTTTTCCTTTCTAGTACGTAACTGTCAGTGTTTAATTATTTGATTCTATGTTTAGATTGTATTCTTTTTTAACCCTAANCTTTTGAGTTATCCAAANTTTTTGAGTTTTCTTTACCTTTTGACTTTTACTTTTGATCATATCTAGGTCGTTCTGCGGATGGGTTTTTGTGATGAGGGTTCCCAGGAAACAGCCTCTCTACTTAGGTAGTGGTAAGGTCTGCGTACATCCTACCCTCCCCAGACCCCACTTGTGGGANTTCCACTGGGTATGTTGTTGTTGTTGTANACATATGTGCAGAATTATAAGTATCAATATCAACACTGAACGACATNTCCTTTAACCTTTATTCATATATCAACTTAAAAAATNGGAAGACGCTTCTCACATCAATCGCCACCGTCAAACCATAACCAAATCAAACTCCCATAGAACTAATAACCATCGTGTTTGTGATAACTCTACCGTGGAAACCTTCACAGATTTTAGTATGGACGAAGGTGATTCAGAGATGTGGAATAGCTTTTCCAACAATTTCAGGCAAGTGCAGTCTGTGTTGGATCGAAATAGATTGTTGATTCNACCAGGTTAACGAGAAACATCAGTCGAGAACACACGAAAGAATGGTGCAGAATGTGGGCCNTAATTCAGGAACTCAACGGCAACATATCAAAGGTTGCCTCTATCTATCTGATTTAANACACTGATTTCACAAATATGATCCATCAATGGAAGAATGATGTTTCAGGCGCGATCCGCAACACTTCCATATATAATAAACTTTTCTAGCTTCTTTTAAATCATTCTAGTCTTAATCATTGATTGGATTAGAAATATCAAGAATAATAACTTCCAAAGTCCGGGAATATATAATCAATTAATATCCCCAAG
SNP_position 1643
sequence_for_GGdesign AATCGCCACCGTCAAACCATAACCAAATCAAACTCCCATAGAACTAATAACCATCGTGTT[T/C]GTGATAACTCTACCGTGGAAACCTTCACAGATTTTAGTATGGACGAAGGTGATTCAGAGA
GGdesign_Final_Score 0.909
Ilmn_Id 21259_1643-0_T_R_1967851473
allele_1 T
allele_2 C
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_09 22.461
DB Program Definition E-Value
EST Name Species Strain