+Marker Data: SOL2157

Crop eggplant
Population AL2010
Linkage Group E_01
Marker Type SNP
Map Position 102.6
Annotation
Source Name SmFL40J02A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd AGTCGTGGCTGCCTCTTGTCTC
STS_primer_rev TAATAGGCCTTACAACCGCAGGAA
amplicon_seq GGCGGGGATCTCTCTCTATACTTTCCTTAAAGACGCTATCACCAAATCTAGGATTTTAAGTTTGTGGGTTAAAGTATTTTCTTTTTTTAAAAAAATCATTTCCGGCAATTGAATGTTACACATATTTTAAGAATTTTTGAACTGTATCTGGATGGGAATCAGGCGTCAATGGGCCCTATTGTGGTTGAATCTATGAAATCGAATGGTTTTCGAAGTTCATATTTTTCTGTTATATTTTGAGGAATGTCCGATCATCAGCTCTAACAAAACCCTGCGAATTGCAAGCTAAGATTACCAGCTTCACTGAATGTACTAATGCTTGATTACTAACTCCTTGCATATTTATTTGATAGCTGATTTAGCGATCCTCAATTTGAGTTAATTTTTCATTTGGGCAATATATATAGAAAATTGAGGTTCCAAATAGCTTTTCATAACACTGGACCTTTAAGGTAGTGATTGATCTCCGTATGTAGAAGATCTCTGTTGGAGGATATATAGAGGTTTTTGGAAATGTATAACATTGTGATGAATGCAGTAAGTTACTTCCCGTCTTCATTAAGAACACTATTTCTTGAGATCAAGTTGGCATACTAGGATATTACTCTGTGACATTTTTCAGGGTATTTTTGAGCTTTAAGTATCAAGTTCGACTTTTTTGAGTGTATCTACTTATTTAGAAGTTGAAATATAGATGTTTTTTCTTGCAATGGGTCAATTAGAACTAGTAGTGGCA
SNP_position 89
allele_1 A
allele_2 T
ASP_primer_S GCGGGCCATTCAATTGCCGGAAATGATTTTTTA
ASP_primer_L GCGGGCAGGGCGGCCATTCAATTGCCGGAAATGATTTTTTT
Common_primer CCAAATCTAGGATTTTAAGTTTGTGGG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_01 102.6
LW2010 E_01 114.4
LWA2010 LWA_01 91.881
LWAE2012 E_01 94.712
LWF2_2022 E_01 70.6

DB Program Definition E-Value

EST Name Species Strain