+Marker Data: est_ae502o01

Crop eggplant
Population LW2010
Linkage Group E_11
Marker Type SNP
Map Position 79.9
Annotation
Source Name AE502O01
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CAGTTGTTCATGGAACCATTACAGG
STS_primer_rev ACGGATGTTGTTACCCCTCACACT
amplicon_seq TAAATGTCGCGGATTCTTCCTTTTAGCGTAATTTTGACAGCCTTCAGATGTGTGTTCATGCTAACATCCACGCCTACGAAAAAATAATACCGTTTCAAAACTTTTAACTCAGAGCTCTCAATTTAGCAAAGTCAACAAGGACAGAATGCATACTTATATGAAAACACATACGGATGTGCTCAAATACATATTTATATGTCGAAAATATATCTAGCAATTTTCTCTAAGTATAAACAACCCCTCATGGAATAAAAGTCAAAAGCATGGAAAGGACAACCAACAGAGAAAGGAAAATGCATATAGGTCTCAAAATATGAAAGTAGGACCAACATTTATGTTTGACTACTCTACTTATCTACAACAGAGATAAATTTCTGCAATACCTAGATAGCCATCAACTAAGCTTTCGTGCAAATTTGACATTTTTGATGCATTCTGCAACCAGCACAAGCCCTGGCACTTGCCATAAGAAGCCTATCAAGGTCTGCTAAGTAGCATCTCTACTGCCAGACAGAAACTAGAATATAATGATTTTTTGGGGGGATAAAGTAATTTTTTAAAAAAAAAATGTCTAGGTACAAAGCATGCCCGTATATTAGAAGTACTAGATTTATCGCACGTGCTTTGCACGTGGTAGCATGATATTGAGTTGCCTACAACTGTAGAGCAGTATGTATACTATATTTATCATAATATATCAGTGGAATTGTCCACATACCCCATTTACCTAATTTATCTCTAGTATCCTTGTACTGCTGAAGAGATTGAAACAGAAGAGATAGATAATGCATACA
SNP_position 128
allele_1 A
allele_2 C
ASP_primer_S GCGGGCAGTATGCATTCTGTCCTTGTTGACTTT
ASP_primer_L GCGGGCAGGGCGGCAGTATGCATTCTGTCCTTGTTGACGTG
Common_primer ACCGTTTCAAAACTTTTAACTCAGAGC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 A A
WCGR112-8 C C

Population Linkage Group Position
LW2010 E_11 79.9
LWA2010 LWA_11 79.275
LWAE2012 E_11 75.456
LWF2_2022 E_11 110.2

DB Program Definition E-Value

EST Name Species Strain