+Marker Data: SOL4171

Crop eggplant
Population LW2010
Linkage Group E_11
Marker Type SNP
Map Position 3.9
Annotation
Source Name SmFL20J07A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TTCTCAAGAATGAATGGGGAGTCA
STS_primer_rev AGACATCCCACACCAACTTTGTCA
amplicon_seq CACAACTTGCACCATCTTAAATTTCTCAACTTTGGTACCAACTTCTGTCACCACACCAACAATCTCATGCCTATTTTCAGAAAATTAAGTTAAACAAAGGTACAATAAATGTTAGAAATATTGAGAAAATAAATGGCAATAATAGTGTATATTTCCACCTACATTTGGAGGTTGGCAATAAATGCCAACTATATATTTCATCTGTCTTATATTATTTGTCATATGAATCGTGATTTACTTTAATATGCCTCGTTAGATGAAAACATTAATTAGGAGGTGTTTTTTGACTATTTTTACACTTATTTATGTTTTTGGTATTTCCTTCGTTCATCTTTACTTGTCTATTATACTTTTTTGGAATATCCAATAATACTTGTCCAGTTTATGAAATCAAGAGATAATTTTACACTTATTCCCTGGTCATTTTCCTATTACATTTTTCAAGACATAGTATTTATTATATTCGAAGAGTGATTTAGTAAAATTATCCTATCATTTACTATTTCTTAATCTCTGTGTCAAGTCAATATGGGATCAATAAAGTTGGATGGAGGGAGTAATTAATCTTGTCTTAAACTTCTAAAACAACAAATACTTTGAGATAATTTTTTTAAATATCATGACAATTAATTTGAGACGTGGAAATAAAAGATTTCGATGTTGACAAATGACACTAGTTAGGTGTTATGAATATAGTCCATCATGATAAAGATAAGACAATTTATCTGCTATTAATAAACTCGAACTTCTTACCCAGGTACAACAGGATATCTAGTGACT
SNP_position 341
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTTGGATATTCCAAAAAAGTATAATAGA
ASP_primer_L GCGGGCAGGGCGGCTTGGATATTCCAAAAAAGTATAATCGG
Common_primer TTTGGTATTTCCTTCGTTCATCTTTAC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 T T
WCGR112-8 C C

Population Linkage Group Position
LW2010 E_11 3.9
LWA2010 LWA_11 3.864
LWAE2012 E_11 9.474
LWF2_2022 E_11 5.4

DB Program Definition E-Value

EST Name Species Strain