+Marker Data: SOL2011

Crop eggplant
Population LW2010
Linkage Group E_10
Marker Type SNP
Map Position 56.5
Annotation
Source Name SmFL27P18A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd AAGGAGGTTTTCTTGCGAGAGCTT
STS_primer_rev CGATGACATATGAGCTACTGTCAGCCT
amplicon_seq TAGATATTTCTGTGGGTGTAAATAATCTCACTAGGGGTAAAATGAGAAGTTTAAAAGTTGAATTATTCGTAAATCTAGAACTATGTTATTCTTTTTGGGATTGATTAAAATAGAAAGAGTAATATGTAAATGGACCTTGGGCCAGTGGGAGTACATTGTTTTCTTGATAACATTAGTAATCATTGATCCTGTAGAGTTATGCGTTAATAGTTACTGCTTGTAGATGACAGAAATCATGATGTATGTTTGTGTCAAAAACCATTTGTCATAGAGTTGACATTCAATTCTTATCTGCACTGGTTTCTCTACCATGCTGCAAATTATTTTCTTTTCTGTCAGCCGAGGGTCTATCGAAAATAGCTTCTCTACCCAAAAAGTTAGGGATAAGGTTTGCATACATCCTATCCTCCCAAAATCCATTTGTGGGATTACACTAGTTATGTTGTTGTTATTGTTGATATCTGGCACTGGTTACTGCTAAAAGATTGCCCATTTTGGGTTTCCGTAGGATTCATTTTTTGCGAATGCATTTGTTGAAGTCTTCATGATGCCTGTAATTGTCTTTTAGAATTTCTTCTTTTCCTTTATGTGCTGTTCCTAACTTCATATTCTTCTTTGGACAGTAATGCCAGTGATGCCCTTGATAAGTTGAGATTTCTGAGTTTGACGGAGCCTTCTTTACTTGGAGATTCGAGTGAGCTAGAGATTCGCATCAAACCTGATCCAGACAATGGGACTATCACTATAACGTACGTGACTTAAGATCTAGATGCTGCATTAATGCTTTCCTAGTAAAGGGGACTAATTAATTGATAATGCAGGGATTCTGGTATTGGAATGACCAAAGAGGAGCTCATAGACTGTCTTGGGACTATTGCCCAAAGTGGTACCTCAAAATTCTTGAAGGCACTTAAGGTACTAAAGGGTAACTTCATGTTGTGGAGTAACTACACTAGTTCAGAGTTTGATTGTGGTTTAAAGTTATTGTCTTTAAGAACTATGCTGCTTTTCTATCTATAGGAAAACAAAGACCTTGGAGCTGACAATGGATTGATTGGTCAATTTGGTGTTGGTTTCTATTCTGCTTTTCTGGTTGCTCAAAAGGTAGCTGCTCATTTTATGTGGTTTTATATTAAAAAAATAGCCATTGCCATTCCACTGATTTTN
SNP_position 378
allele_1 T
allele_2 G
ASP_primer_S GCGGGCTAGGATGTATGCAAACCTTATCCCTAA
ASP_primer_L GCGGGCAGGGCGGCTAGGATGTATGCAAACCTTATCCCGAC
Common_primer CTGTCAGCCGAGGGTCTATCGAAAATA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 G G

Population Linkage Group Position
LW2010 E_10 56.5
LWA2010 LWA_10 58.877
LWAE2012 E_10 64.619
LWF2_2022 E_10 59.8

DB Program Definition E-Value

EST Name Species Strain