+Marker Data: est_smfl18k11

Crop eggplant
Population LW2010
Linkage Group E_03
Marker Type SNP
Map Position 85.6
Annotation
Source Name SmFL18K11
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TTGGGTCGACTGGCTCTATAGGAA
STS_primer_rev CGAATGGACCACCAGCAATTAAAG
amplicon_seq NNNNNNNNNNNNNNGTAGNGCGTTAGTAACTTGCAGTTACAGTGTCAACTAAAAATTCAACTGTTTTCTCTAAAAGAGGATGAACAGAAACAAATTTACCTAGATTCCATTCTGCATCTTTTTTATCTGTTCTTTATTATTAGTGGTATGCTGCTTTTACTACTGTGCCAATTATGCCAGTTGCCTTTTGCTTCTTTTTTTTTTCTTTNTGTATTGTTTGGGTAAATGAAATTCCAGTTATTATAGGTTGCTTGGTATTCCAAAAAATCAAAATTTTGTTTTGATTCTCTACTTTTTGTATACTATTATACAGGAAGTCCTTCCAATAAATCAATGTATATAATTACTTTCACAACAAAAAAATGCCAGTTGTCTTTTGTCACATTGCTTCAATTTGAAGTTTGTGTCTGCAAACGTTGGATATCGTCTCTGAAAATCCAAACAAGTTTAAAGTTGTTGCACTTGCTGCTGGTTCAAATGTGACCCTTCTTGCTGATCAGGTTGGTACTCGTTTTATGCACGCAAGTGGAAAAAACCATGAAATGTCAAATTTGAATAAAATAAAAATATNTTGAGGCATCATGTGGCTTTTGCTGTTTATAACACGGCTGGTGTTGTTTAAAGATATGATGATTATCCAATTATAAAATGGTTCCTCCTCATTCCACCCACTGATTTCCTGCCCTTCCAATTCTACTAGCGTAGACGTGTCATGTTGCAGCCCATTGATTAATGATTGATATATCCCATTAAACAAGTTGAAACACATATATCAGTGCTATGTCTTCCAATTATTACCATGTTTTTTCCTTATTTAGTTTTGGNATGATCCACTTAAAAGATGGTGAAAATCATTCAAGCTCATTTTATATTACATGCTATTTTATATATTGNATCGCAATTTGCACAAGTGTGAAGGAAAATATTTTGTTCTTCAACATGGATACCAACGCATCAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNCTCTAAGTAGGTCAAAACATTCAGACCAAAACTAGTTTCTGTTAGAAATGAATCATTGGTTGAGGAACTCAAAGATGCTATTGCTGATATGGAAGACAAGCCGGAGATTATACNTGGTGAGCAGGGNATCATCGAGGTTTGTACAACTGTCCGTAACTCTTTCTTTAGCAAGTAGAAGTCCAATTCACTGGTTGGTAATTACTTTTTGACTTTTGAAAGAAATGTGCTGAAAATTGTTGTCTATGATGTGTTTCAGGTTGCCCGCCATCCTGAAGCTGTCACTGTAGTCACAGGAATAGTTGGCTGCGCAGGTTTAAAGGTGAGATTGAGGTTTAAGTNTATCTGAATCTTTACGAAATTATGGTGACACTCCTGCCAAGATATCCTTATATCCCTTCTAAAAAGCTAATTGGAGTGAAGATTGATTTATTTTCCTGTTTTGTGGGGTGTGGGCGGGAGGGAGAACGGAAAGCTTGTCGTTTGGAGGGAGCTGTAGACAAGACATACCTGTCTTAATCAATAAGCAGAAATCAACTAGAAGGTTTCTTCAAGTGCTTTCTGGCTTTATAATGGCAGTGCTGGAAAGACGTCGAGTTTTACCCCACCAATGCAGCAAGAAAATACCTTCTATCTATCCATGTCAGGAGATAATACTACATTCATCTTACTCTTGATTCCTTTGGAGACAGACGCACACAACTCCAACCTAGAAACAGGAGACTTTTTCTTCCCAGAGCTAGCTCCCTTCTATATNATAATCATTTTAAAAACATTTGTAGCTAAAAGTAGCATTGTGTGGTAGTTTAAGTTGTTATTGAAACAAAATGTCGGTCATTGCTTCTTGCTGTGATCTTTAATAGAGCATTTTCTCNGCTACTATAAAACTAATGAATCATTCAAGAAAATTTGTGAANCATTCAGAAGATGTTCTCAAATTTTTTGGTCTTCGTTTGCTTCACTAGCCTACAGTGGCTGCTATAGAAGCAGGAAAGGACATNNNNNNNNNNNNNN
SNP_position 1260
allele_1 C
allele_2 G
ASP_primer_S GCGGGCTCCTGTGACTACAGTGACAGCTTCAGC
ASP_primer_L GCGGGCAGGGCGGCTCCTGTGACTACAGTGACAGCTTCAGG
Common_primer TTGTCTATGATGTGTTTCAGGTTGCCC
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 G G
LS1934 G G
Nakate Shinkuro C C
WCGR112-8 C C
Population Linkage Group Position
LW2010 E_03 85.6
LWA2010 LWA_03 87.389
LWAE2012 E_03 91.557
LWF2_2022 E_03 91.5
NAF2 NA03.2 0.0
DB Program Definition E-Value
EST Name Species Strain