+Marker Data: SOL7177

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 44.0
Annotation
Source Name SmFL12H19A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TGATGGCTTCTTATCACCTTCCAA
STS_primer_rev AAATTTTGCTGGTCCACAACTGCT
amplicon_seq NNNNNAATGGGGTGAGTACCCGTTAAATGTAATAATTGTGCTCCTATGCTTTCTAGAAGTGACGGGTTTATCATTTTCAATTGAATTCTTTGTGGGTAGAATGAAAGGGATCCAAATGGACTCAAACTAGTTTGAGATTGAAGAATGGTTTTACCTTTTGTTCTAGTGTTNTTCTATTCATCGTTGTTGATTGGTGTCTGTGCATATATACTTTCTATTATTGTATTTACTAGACCTTGAGAAATTGAGATNAAGGATAGTGCTCAAACCCGGATCAGGACCAATGACGGACCCAACCCATGATTTTACACAAGCCATTCAATCATTAAATAGGGATAGATGNTGATAGCCAATAATGTAATCAACATCGAGCACAACAAATTCTTTTTGGTTAATAATGTAACCTCAAGGTTTTTTTTGGNAAAAAACAACATTCTTTTATTTCATAGAGTTGAGAAAAAATTGAACCCACATGGCATCACGTGGGTTTGCTCCTGGTCACAATCGTGGGAGGTGACTCGGAACATTCTGTGATCATGATGGGGTTGCACGAGGGATCTGATCATAGACTTTTTTATTTGCTTGGGCAATGGACGTACTAATGCGACACATTCAAGAAGAGGTGCCTTGGTGCATGCCATTTGCATACGGTATAGTTATGATAGACAAGATGTGAGGGGCAGTTAACATGAGGCTAGAGGTTCGGACATCGATCCTAGAGTCAAAAAAATTTAACTTGAGTAGGACCAAAATTGAATACTTAAGTGCAAGTTCAATTAGGTGTCTTATGAAGCAGATGTGGATNTGAGGCTTGACACAGGTCATCTCTAAGAGAGGAAGTCTCAAGTACATGTGGTCTGTGATCCAAGTAACAGGNAGATTGATGAGGATGTCACATATCATATTTGGGGGTGAATGAAAAGGAGNCTAGCATCCGATGTTCAATGTCCTTCATGGAGCTGGACCTTCGATACTGGAACATATATGTTCTTCCTGGTTCATGAACTTGTTCCACATNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNACCAGNATTGTNGCACCATCTGTATCGCTTAACATANTTTAGTGATTATCACATCNATCAGTAANTTTCTCTTTATTTACTTNGAATCTTCAATGCNACTTNAAAAGAAAGCTTTTGTTCCGTAGATTGAGATTTTTAAATACTGAAACTTCATTTTTGTCAGTTGTGACTGTTCTATTTCACTAAATGCATTTTCCTTCAATATTAATTTTCTTCTCACAGAAAAGTTCACCTTATTCTATCCAATTGCCTTTCCACTTCTATAGGCATAGGAAACGACATTTAAGTGAGTAGGAATCACCATCCAGCACACTAGTTATTGATAAGCTAGTTCTGAGAATTAACTTGTCTATTTCGGGATTGGGGTAGGTGATTTGCTGTTTGATGCTCTTTGAAAACGCTGGACAAAGTGAATTTATACCTTTGTTGAATATGTGATGAAGTGAGAAGCTATCTAGTCACAGGTAAAGAGGAACTGTACAACATTTGCAGGTGGGGGGAAAAGATCCAACATAAGTAAAACATATGCACCTATTTCTTTTTGTATAAAATAGATCTACTTCTGTGAGGTTCTTTTTCTCATAAATAGTTGGCTAGCTTACCTTTATTGTGAGTTTTTCTTTTGACATGTAATTGCATATTGAGCAACTAATTGAGTGCAACTTGCTCACAATAGGTGAAGGTTCTTTCATTGACAGATCATGATACTCTATCTGGCATCCCTGAAGCTCAGGAAGCAGCTAATAGATTTGGCATTAAAATTATTCCCGGAGTTGAAATTAGTACAATGTTCACCCAAGGGTCAGTATTGATTTGGTTTAATTTATACCTTTAAACAGGGCAAAGATATAAACTTATTTTTTGGTTCTCTCTTCCTTCAATTTTCTATCTTTGGTGTTTTTACAAAATTGACGACACTGTTGATCCTGGAGATTTTTTTAAATCCTGTCATCACTCAACNGCAGAAATTTAAACGTTCTCATTACAGGAAGGACTCTGCATCAGAGAACCAGTGCACATCTGCTTNTCCC
SNP_position 668
allele_1 A
allele_2 G
ASP_primer_S GCGGGCCCTCATGTTAACTGCCCCTCACATCTT
ASP_primer_L GCGGGCAGGGCGGCCCTCATGTTAACTGCCCCTCACATATC
Common_primer TGCATGCCATTTGCATACGGTATAGTT
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_12 44.0
LWA2010 LWA_12 45.972
LWAE2012 E_12 46.948
DB Program Definition E-Value
EST Name Species Strain