+Marker Data: SOL5020

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 101.6
Annotation
Source Name SmFL22D11A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd AGAAAGCTATTCAGCAACAAGGGC
STS_primer_rev TCCTGATTGCACATGGTCTACAGC
amplicon_seq NTTTTCACATAGCTCATAGGATCAAAATCTCAATCCTTGAGTTATTTTTTCTTGGATTTAAAAGTCCGTGCTTGTATACACTTTAAATTTCTCTGGGCAATTTGGCATTCCCCTGGCCGGTTAACATGAATTTGGGCTACTGGCCATCCTATTCCCCTTAGTGTTGTTTTATTTCAGTTCTTTAACATGCAACTCAATATTTTGATAGGTTTGTTTTAATCACATATATTGAAACATGGTGCCTTATCTTTGTCTCCTCGCGACATTTTTTACCATGTCAGAAGTTGCTGCTTGCATATACTTGAGTTTTCGAATGTAGTTTATAGATCTTCAAATTCCTAGAAATGGAATAGAAGGTGGGAACTGACTATTCCAAATTAGTGAAACTTACACTTCAGGGTCCCAGTTACTGCCGAAGTTTCATGAGTATGCAAAAAATCGAGCTAAAAGAAGCGTCTTGCCCTATGTTAGGTGGCCGTAAACCATTGTAACATCTTGCAAACAGCTCTTGTTTAACATTATGTTGTTGTGTTTATTTTATTATGTATTCCATTCTTTCAAATGCAAATGCCATATCCCTGCATCTATAAACACTAGAGAAGCAATTTTTAGCTCCTTCCCACTCGTTAGAGACCACCATAAAGTAATTTAGATTCATCTTAATTCTTATCGTTGTTAGCTGGATGCGGCCAAGTTGACAAAGATCTCTATAAATCGTCAAGCTGCTACTGCTAATGCTTGAGCAGTGGCTTGCCCTTCAAGTAGTGTAGCATACAATGACCCATCAAAAAAGTGAATTATGCAACATATTGGNAATCGTGTTCAGAAGAGAGCAGATAACTGGGTAATTAGCTCAGAAGTTAAATGTAGAATGACAATTGTCCCCCTTCACGTGATTTTTTCCCCCATCTTTCTCTTCATTGTCAGTTGAACAATATTACATGCAAACTTTTTTCCTTTTTGTGAGATAAATCAGCTCATTTACATGTATAATATTTCTAGCATGGCACTTGAAATTTTAGCAGTAATATAAAATGCTCTCTCAATGTTGGCATCTTGCAGATAATGGGCACACTAGCTGAAATTCAAGAGCGCCATGACGCAGTCAGAGAATTAGAGAGGAAGCTTCTTGAGTTGCAGCAGGTACTATATACTTATGCCTTTTGACAGGGAATGGAAGTAGTAGCAAAGATTTCATTGGAAAATCTCAATTGATGAAGTGGAGAGAAAGGACAAAAAATTCATTGACTACAACATAAAGAGTTTTTCCCTTCGTTTATATCTTCTGGTCGTGGGCCAGATTCGACTCTGGAGAACTAAACATAGTCTGGTTCGTTCTAGGCAGATGAGTTCGGTTTAATCACCTCTAACCCAATGCCAACTTAAAATAGGCCAAATAAAGGGTCTCTCCCTCTGTGTTGTGTGTTTGCCTCATATGCGTTTATACACGTGCATATACAGTTCTTTGGGGAGGGGAACATGCATAAGTAACAGTGCCATGATTGAAAGAGTTCCCAATAGAGGAGGAAAAAAAGGACGCAATGCTGGCTGGTTATAAATTTTGTTCTGTTCTGCAATGCAGATATTCATGGACATAGCAGTGTTGGTTGATGCTCAAGGAGACATGCTTGATAATATAGAATCACAGGTACTGATATA
SNP_position 1535
allele_1 G
allele_2 A
ASP_primer_S GCGGGCATTTATAACCAGCCAGCATTGCGTCT
ASP_primer_L GCGGGCAGGGCGGCATTTATAACCAGCCAGCATTGCGGCC
Common_primer AGTGCCATGATTGAAAGAGTTCCCAA
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_10 101.6
LWA2010 LWA_10 88.938
LWAE2012 E_10 96.048
DB Program Definition E-Value
EST Name Species Strain