+Marker Data: est_per06o01

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 38.6
Annotation
Source Name PER06O01
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GCGGAGAAACTGGCTAGGAAGAAA
STS_primer_rev CCTTCGATTCACTTCCTTTTCCAA
amplicon_seq AAATCTTCAGTTCCTGCATCATTAGTCCACTGTTAGTATTTCCTCTTATGTACTAGCTACTTGTGTTTACTGTAGAAACAGTGTTATCAACACGAAGGATAGTGTAAAGGCACCTTAGGTCCTAAGAACAAGCCATAGGGGACACCATTGAACTTCTCTGAATGATGAAGCTGCAAATTCAGATATCAAACACATGCATTAGAAAATCCTACCTACTGATGTATTACTCAACGGTCGCACTAAGTGTGATTAAATTACCGAATGAGCTGCAGCCACCTTCCTAAGATAAGGTACATTGGCTACAGGTCCAACCGGGAATCTCTTGTGAACCAAACCATCATGAACGAACATGTATGCCATCCCAAATACTGTGATCCCTAGCCCCTGCATAAAACAAGAGTTCAGTTTCATCGACAGTTATCTTAATCCAGTAACATTTCTAGACTATCCTAGGGAAAGATTTAGAGCATGATCGTCATTGCTCTCAATTCGAATCATTTACACTATATCATCAGTATATAAATATGGATGACGTCCATTATGAACTAACAAATTCGTTCTGCTACAGATCATACTTAACATTACAAAAGAAAAGACGGAAAGTTAAATGAGAGCATACAGCGCCGAAGCAGAGGCCGGGAATGAGGCCTTTATGGAAGAAACCATAGTCGAGGAGGGCTATTGCTGGAACAGCATTTATTATGGCGAAAACATCATTCAGCTCAAAAGGTCCTTCTCTTGGTTTGTGGTGTGACTGCAACAATTTTAACGTAACAACAATCTTAATATAAAGTTTTCGTCACAAAGGATGAAATGAGGCATTAACTAAAGCTCCAAATTGTAGAATTATACTGTAAGTAGTACACAAACCTCGTGCATGTGCCATAGAGAAGCGTGCCACAGAGCTTTATGTGCCCACCTTGCCCAAAACTCCATTCCTACCTGAAATTTCCAATTTAAAATCAGTCAATTCTGCTATTTCTAGTTACTCTCTTGGAACAAAGTTGTTTCACTCTCCAACATAAAAGCGCCTTCCTATGAAGATCGAAGATAGAAGGCAGAACTTACAGCAGCACCAACAGCGAGCGCAAATGTACCCAACATTTCGGATAAAGGAACTTCTCTGCCCTACACCAAAGAGAGAGAGAGAGAGAGAGAGAGAACTCAGTAAGAAGTCAGTTTCGAAAAGAAGAAAAAGAGTAAAGTGCGAATTACTGTATGAACTTTTCATGTACCTCCATTTGCCATGAAAATCTGTAATAAACCGCCATAACAGCCATGGAAGTAATGCCAAAACTAGACATAACAGCAGCCACAAGATAAGTACT
SNP_position 239
allele_1 A
allele_2 G
ASP_primer_S GCGGGCACTGATGTATTACTCAACGGTCGCA
ASP_primer_L GCGGGCAGGGCGGCACTGATGTATTACTCAACGGTCGCG
Common_primer GTGGCTGCAGCTCATTCGGTAATTT
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_06 38.6
LW2010 E_06 36.2
LWA2010 LWA_06 37.248
LWAE2012 E_06 43.888
LWF2_2022 E_06 42.5
DB Program Definition E-Value
EST Name Species Strain