+Marker Data: SOL8165

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 45.2
Annotation
Source Name PER08M02A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TTCCTCATGGGGATTCATCAGTTT
STS_primer_rev ATGAGACAGCCACTTCATCAAGGA
amplicon_seq TTATTCAGCCTTTTGACGAACTTTTTGTAGATTTTCAGGTATTTGATTGGTGTAAAATTCTTCGACATATTCTGATGTACTAGACAAAGTTTCAACAATTGATCATATGTACTTGTAGGAGTTCGATGTGGATGCTTTGGCAAAGTTGGTCGAAGAAGCAACTATTCCTACTGTGACTGTATATAACAAGGACCCAAACAACCATCCATTTGTTATTAAATTCTTCAACAATCCAAATGCCAAGGTGCAGCATTTNCTTAGTCTACGAGATTTATGTTGCCTTTTAAGATTCTGATAGTCTTCTTGCTGTCTAAACCTGCATCTACTTTCCCATACTTTCTGTTGATAGATCTCTTTAGTTGGAATATATAAGAAGTGATGTACACTAGACAGNTGAATNACATAATGCATGCTATTAATTCTCTTACTTGGTGTCTCTTGTCCTCCATTTTGGAGGAACATTGTTTGATATATTAGAAGATTAAGAGCCTGTTTGGATTAGCTTTTGGCTTATGACTTATAAGTCAAAAGCCATAAGTTAGGATTTCTAACTAACGGCTTTTGGCCTGTTTTTGTTGTTTTGCCTTAAAAATAAGGATTTATGGTCTTCCATTGCGTTCGTTCTTAGATGTTATTTCNNNNNAGCAATAAGCATGAACTCTTCATGTATAATATTTCTAACTAANCGGCTTTTGGCCTGTTTTTGTTTTTTTGCCTTAAAAATAAGGATTTATGGTCTTCCATTGCGTTCGTTCTTAGGTGTTATTTCATTTCTGCAATAAGCATGAACTCTTCATGTATAATAATAAAGCGCCACTAGCAAAGATAGATGTATAAAGATTGGTGCAAGATTCATCTGTTTTTTTCCTGAAAGTATCGTTGTTCCTCGGGGACCTCCAGAAAAGATTGANGTTTTCAGTGTTTTTAGCCAATAAACTTGTTTATCATGGCTGCTGCTTGTTTAATATCCTTTTAGCATGTACTTTNCTAGANGCTGAAGTTAAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNGAAGCCGNNNNNNNNNNNNNNNNNAAATGTTGAGCTGATCAANTTGCTTCATGGATTAAGGAGTTTAAGNNNNNGNNNNNNTTCTCCTGCNTTCACTTTTTTCATTTACCNTTTTCTCTTGGTTTAATCGTTTCTCCCAGGTTTTCTCATCCATTATCTATATATATTCATCTTATATATATCCCTTTGGACATTTTAAATGGACGAGTTCTCCTCTTACATTCAAAGTTATACTTAATCAGTAGCAAATTGAATGTAAAGAGAAGTCCTCAAGAAACATTGTTTCTAGGGAAAAATTGTTTCTTGTACTGTTTCTGAAGTAATTACTTGATCATACTGTAGGACGGCAAGGTGAAACCTTTCAAAAAATCAGAACCTATCCCAGAGGTTAACAGTGAACCTGTTAAAGTTGTGGTTGCTGACAGTTTACAGGATATGGTTTTCAACTCTGGGAAGAATGGTATTTCCTACCTACTGTTCAAATTTTACTGACATTTTGTCATTTCCATCTTAGGCAGCTCATATAGATTTCATTGTCTTACTTCTCATGCATTCTTGTGTGGTGTAAGTATTTGAAAATGAAATTGTATATTTCATCTTCTTGTATGGCTCTATAGCATGACANTCATATATTTGAAAAGCATATACACCGACTTACTNCAGTGGTTATTTGGAGATAAGTTGTTCCAACTNNNNNNNNNNNNNNNGTTCAAGAATGTTGCTAAGTAGCAGTATCAAATATATGCTATAAATTCAACATCTGCGGAATAGGAGACGGTATTAATTAAACAAATTGCATCACAATGTATTTACATGCAATATNCCATGAAGTTATGAGTCAATTATGTGGCGTAGTTCAATTTCTTCCTTCATCTTAGTTGGGTGTATTATCCTTGTGTTCNTCTTGCTCGTCTTCCTGAACTTGTACATGGTCTTTTGTTAGAATATTTGTTGGATATGCAGCAATAATAATTCATGTGATGGTTTTTTCTTATAGTACTCCTCGAGTTCTATGCCCCTTGGTGTGGACACTG
SNP_position 1862
allele_1 A
allele_2 G
ASP_primer_S GCGGGCATTGCATCACAATGTATTTACATGCAA
ASP_primer_L GCGGGCAGGGCGGCATTGCATCACAATGTATTTACATGAAG
Common_primer TGAAGGAAGAAATTGAACTACGCCACAT
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_06 45.2
LWA2010 LWA_06 44.189
LWAE2012 E_06 50.848
DB Program Definition E-Value
EST Name Species Strain