+Marker Data: SOL6088

Crop eggplant
Population AL2010
Linkage Group E_05
Marker Type SNP
Map Position 46.7
Annotation
Source Name SmFL17C20A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TGGCTTTTCGTCTAGGGTTTTGAG
STS_primer_rev AAAGTCGGAACCACCTTTATGCCT
amplicon_seq NAGGTGAGTGTAGTAGCTCAGATGCTACTGTTACTACTGCGACTGTGACGGTGGGAGAGGTTACGGAAGTTTGTAAGGATACGTTCTGGCCGATTGTTGAAGCTGCCGGTGAGAAAACTGTCGTTGTTGATATGTACACACAGTGGTAAAGTTACATATACTTCCTATTTTCCTTTTAGATTTGATGAATTTAGTGCTTAATTATGATTGTTAATACTAAGAATTAGTGTTGATTTTGTTTTTCTCTCTTACTCCAAGGATTTTTTAACTCAATATTAGTGTAATCATATAGGATGAGGAGGAGGATTGAGGTAATTTGATAATAGAGGTAATTATAACCATTTAACTATGATTAGTAGCATATAAGGGTGCGGCGTACTGGTCAAATGAAGCTAGAATGAACGACCTTGGTTGAACAAGGTTCAAAATATAGTGAAGATAAAAGGTGTATTCCCCTCCGTATCCATTTGATTGTCCTGTTCTGAGTTGGTACGGAGTTAGAAAAAGTATATAAGAATTTTGAGAATCTAAAATCAAAGATACCTAGAATGTACCAAAATACGATTTAATCTTACATGTCATGGGAAAACCTAAAATTAAAGAGTTGTCGCAAAAGGAAAGAGATGTTCTTTTCTAAACATACTAAAGAGGAAAGTAGGGCAAATAAATTAAAATGGAAGGAGTAGTTGATTTATTAATATGACTATCTGAGACACGTATTGGTTCTAGGATGCTGAAACTCGATAGAATATTTGAGGTCTGAGTAAATTGAGCTGCACACTACCTCTATCAAGGAAAGAGGGAAANAAACTATGATAAATTCTCTGAATACTGCAAGGAGTTCTTTTCGTTTTCCTGAGAACAATAGAATAGATTATGAATCCATGATTGAAAGAGAATGGATTAAGAAGATTCATATAGCTAACTCTAATTCATTTGGGAGTGGCATGTGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGATGAACTCTTTTATTGGACAACTTGTAACAGAAAGTATCTTCAAAAATTTATGGTTAGCTTGGATTAGCCTCTCATCAATCATTCCCTCCTAATTGAAGTGATTATTGAGATTGATAGATAGTTGAGAATATTTATGCCTGCTGGTTTCTTGGCTTAAGGAATTTCAGTTGACTCTGCTTTCTCTTGACCTTATGGAATGTATGTAGTAAAATCTTATTTGGCTGTAACAGAAAGAATGTTAACTGGTAGTTGACAGTTCTATAAGCTTCTGCTGTCGCCAAAATTGTTTTGTAGATGGCGTTGATTCTACCTAGGTGGGTATTGGTATATTTATTCAGAACTGAAATTACTATCATTCATAGCTCTACACCTCACAAATGAAAGCCTCACGGGCTTCACTTCCCATGTGCCAACATATTACAGTGTGACGAAGGAAATACAAGGCAGAGGAACACCAAATTAGTGCAACGGACTTTCAGTATTGATCTTCATGNAATGATATTCATGTATTCATCTTTAAGAAAGCAGAATATAAAATATTGCATGCACAACTGTTGCAGACTAATGAATGATCAATTGATTGGCAGATGTGTTTTTTATGCTTTCAAGTGTAGGATTTGAAGAATGAATCTATGTATAAGGGGGTTATTCATGCCCTCTTGTCATTGCCATGCATTGTCGCCTGTCTGATATATGATTACTCGATTGAATGTTTCTTTGAATTTTGAACTAGTTGTTTTCTGGACCTTACTTTTATCGTCAGTAATGGAAGTGTCTTCTCCCTTTGTCTTGTAATTTCTGATTCCAATCCACCTGCAGGTGTGGTCCTTGTAAAGTGATCGCTCCAAAGTTTCAAGAGCTATCGAAGAAATATAACGATGTGGTCTTTCTGAAACTGGACTGTAACCAGGACAACAAGGTATGTATTCTTTAAATCACCTCCCCTTCTAACGAAACAATACAACACACACTAGAATTGATCAATGTGATAATTTGGCAGCCN
SNP_position 738
allele_1 A
allele_2 T
ASP_primer_S GCGGGCGACACGTATTGGTTCTAGGATGCTGAT
ASP_primer_L GCGGGCAGGGCGGCGACACGTATTGGTTCTAGGATGCTGAA
Common_primer TGTGCAGCTCAATTTACTCAGACCTCA
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 T T
LS1934 A A
Nakate Shinkuro T T
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_05 46.7
LWA2010 LWA_05 51.341
LWAE2012 E_05 41.395
DB Program Definition E-Value
EST Name Species Strain