+Marker Data: SOL8589

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 54.5
Annotation
Source Name PER03A13A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd gctggcaaggcagtcactaagaaa
STS_primer_rev tttgagggctttgggagaatatca
amplicon_seq TTTTATTAATTTGATTTTTTTTTTCAAATTTCTCGATTGACAGAAAATTGGATTCAATGAGAAGGTGTATGTTGTTGATCTTAAGAAAGGAGAAACAAAGGAAGGTTAGGTTATTGGAATAATTTAGCAACATATGTAGAGAATTTATGTTAAAAGGATCGAGATTTTATCAGTTTCTAGGTCGAATTGTCAATTGAATTCCGTGGATCCGAATTGAATTTGGGTATTTTGTTATTTGGGAATTTAGGGCCATATGAGGGTGGGAAGCCTGATGCAACTTTTTCATTTACTGATGATGATTTCGTGAAGATCGCCACTGGAAAAATGAATCCCCAAATTGCCTTTATGAGGTGCTATTATTTTTCAATACTATGTTGCTCAGAGTCGTCAAAATACTCGAGGGGTGCGTGTTAGATCCTTCCGAAATAGNAGAGTAGTATATTAATGGAGGATCTAACACGAGTGTGATCGCGTTTTTGGAGAGTTTGAGCAACATAGTTATCTATGCCCTTTTCAATTGTTGGGATTTTTCATACTTTTTGCCAGACTAAAAGTTTTGAGCTTTTTGGTAATTTGTTGTTTTCGATTGGTTCTTGATGCAGGGGCGCGATGAAGATTAAGGGCAGCATAAGCGCAGCTCAGAAATTCACACCTGATANNNN
SNP_position 395
allele_1 A
allele_2 G
ASP_primer_S GCGGGCACTATGTTGCTCAGAGTCGTCAAAATA
ASP_primer_L GCGGGCAGGGCGGCACTATGTTGCTCAGAGTCGTCAAACTG
Common_primer CTATTTCGGAAGGATCTAACACGCACC
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_04 54.5
ALF2 AL04 99.9
LW2010 E_04 80.7
LWA2010 LWA_04 84.925
LWAE2012 E_04 82.801
LWF2_2022 E_04 106.7
DB Program Definition E-Value
EST Name Species Strain