| Crop | eggplant |
|---|---|
| Population | AL2010 |
| Linkage Group | E_03 |
| Marker Type | SSR |
| Map Position | 89.4 |
| Annotation | |
| Source Name | emd19D02C |
| Source Type | genomic |
| Source Sequence | aacaacatacatctagcaaatctcaGCAGCAGCAatttgc tttgcagggtgtgccggatagggtgactgatgaggtgttc atcgctatgtcaaaggcactcaactttataaaccctgatg aactttcaatgcagtgcatcttgatcgcattgaacaggtt tcttcaggttagaatcctgatcccacattgaaaacAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGggA GAGAGAGAGAGaagtaatttattctttccaggTCTCTCat attacaggaaatctctacctaaggagcttaaatgtgattg aattgtccataagtgcatcttgtttggcacccaacactac attgctgcaggaaacatttataatgccggtttcgaagatg aaacttttgaagttaccatctgtaaaagaatgtacttcgt tttggcttgttacttctggaaggcgtggcttgctccacta gatttcatttgtagggacaggtttctctaggttgagggca tatagtttgactgctggagaagttctttttatagatgtac tcttag |
| Developer | NIVTS |
| Document | Nunome et al. (2010) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153 |
| motif | (GA)20GG(GA)7 |
|---|---|
| PCR product (bp) | |
| fwd primer | eme07D02/U |
| fwd primer seq. | gtgactgatgaggtgttcatcgct |
| rev primer | eme07D02/L |
| rev primer seq. | gtgccaaacaagatgcacttatgg |
| fluor. primer | |
| dye | |
| fluor. Primer seq. | |
| PCR condition | |
| polymerase |
| Line | allele-1 | allele-2 |
|---|---|---|
| AE-P03 | 291 | 291 |
| EPL-1 | 291 | 291 |
| LS1151 (S.linneanum) | 285 | 285 |
| LS1934 | 281 | 281 |
| LS4021 (S. incanum) | 269 | 269 |
| Nakate Shinkuro | 291 | 291 |
| Senryo 2 | 291 | 291 |
| Shironasu | 291 | 291 |
| WCGR112-8 | 289 | 289 |
| White Egg | 291 | 291 |
| Population | Linkage Group | Position |
|---|---|---|
| AL2010 | E_03 | 89.4 |
| ALF2 | AL03 | 86.0 |
| LW2010 | E_03 | 108.5 |
| LWA2010 | LWA_03 | 110.019 |
| LWAE2012 | E_03 | 119.194 |
| LWF2_2022 | E_03 | 131.8 |
| N28F2 | E_03 | 110.1 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
