+Marker Data: est_pla03m14

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 78.3
Annotation
Source Name PLA03M14
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TGATGGCCATTCAAGGAGAGTTTT
STS_primer_rev AGCCAGTGTTTTCTTCACTTTCCC
amplicon_seq AGGCGTTAGCCACTAGACCTTTCGCATAGCCACGTGTGGCGAAGACTTTTTGGTGAACTTTTATGAAGGACCCCCATTTAAATTCAAGCTGTCTCACAGGTTCCATATCCTTTCTGTTATGTCAAATTAGTACAATTGTCTCCTATTCTCTTTTTGGTATCAAATCAATATATGGTTATTGTTTTCTCCAAAATGTTTGTCCAAAGTGATCAGAGAGAAACAATCTGTTGATAAATGAAGAGTAATCAGTAAAACATTAACCTGGAGAGAGAAGATGACAATTTTAAAAGAAAATAAGGATCTGTCTTTCTCTGAGAAAATACAGCACTTCTCAACTATTTTGCCTGGACTCTTCAAAATAATCGATTGGTGCATGTCAGATACTCCAGAATAATGCATTTTTGGAGAATCCGACACGGGTGCGGCAACATTTTTGGAGAGTCCGAGCAACATATGTTTTAAGGAAAGGGGGAGGACCTTTGAGAGAGTTCATTTTGGTGTACATGATAAATCGATTCTAGTAGTTTAGATTATTAGAGCTTACATCATGCATGATACGTATACACCCTTTTATCCACCTTTTACTCTCCCTGTAGCAATGTTGGTTTTCGTCCCTTGTAAACTGCCTACTAGAAATAAGGCCAATGCTTAGCCTTTCTAAAGGAATTTAAAAAAAAATATATATATATATAGAGTTATAGTTCCAGACCAGTTCTGCGATTTTTGGCATGTTCTTA
SNP_position 186
allele_1 C
allele_2 A
ASP_primer_S GCGGGCTGATCACTTTGGACAAACATTTTGGAT
ASP_primer_L GCGGGCAGGGCGGCTGATCACTTTGGACAAACATTTTGTAG
Common_primer CAATTGTCTCCTATTCTCTTTTTGGTATC
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 C C
LS1934 A A
WCGR112-8 C C
Population Linkage Group Position
AL2010 E_03 78.3
ALF2 AL03 74.8
LW2010 E_03 100.3
LWA2010 LWA_03 102.746
LWAE2012 E_03 108.404
LWF2_2022 E_03 113.4
DB Program Definition E-Value
EST Name Species Strain