+Marker Data: SOL8461

Crop eggplant
Population AL2010
Linkage Group E_02
Marker Type SNP
Map Position 93.3
Annotation
Source Name SmFL07F03A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tctccatcgacaaacaacatcaca
STS_primer_rev cgatctaatcactttcgctccgac
amplicon_seq NNNNNNNCCTCTCTTNCGCGTTNAACAATTTAATACTTTTGAATTTATGAATAGCTATGAAATAAAGGGTTCAAATTGAACCATATTCAATATAGGCTGCGAAGATATAATTTTTTTTTTAGTTACTGTCTAAAACACACTAGCTCGAATGAGGAGGATTGTTCAAGTCTTCCAAGGAGTCACGCTCATTCTTCAGCACCACACCTCACACCCAGTGGTGTGGGCAATTTTTAATTTTTTGTGGCTTAATATTGGGTTGCTCTGATACCACATAAAATTATGTCAAGCTTAGCCAAGTTATTTTTATATTTATGAAAAAATTACGGAAATACACAATTTATCTTTACATAATTTCATATAATCCCGATTCTCTTAAAAAATTATAAAAATTTCTTAAATGATATAAAACTGCAACATCTAGTATCACTAGTTTTATTTTTTGTATCAACAAGAAGGGATTTTTGGTAATTTTGAAAAAAGTTAATATTAATTGGAATTAACCCTCAAAAAGTATGAGATTTGTGTAAGTTATACTATTTTTATTGGGTTAATGTTCAATTTTTGGCAGACTGGAAGTGGGTTCATAAAGGTGGTTAATCAACCGAATGGAAACATTTACAATCTTCAATTGAATGGTGGTCATGAGAATGGCAGAGCGAAAGAGTTCAAGACTAATCCAGCAACAAACGACTGGATTCCCAGCAGTGATGATTATCAGGTTTTGTTACAATGAGTTCATCAACTCTCCATGTGTTTAATTACACTACATATTTTTGTTCACTTTTATATTTTATCAATCAGTTGAATTCACCTCCTCAAACNN
SNP_position 284
allele_1 C
allele_2 T
ASP_primer_S GCGGGCAAATAACTTGGCTAAGCTTA
ASP_primer_L GCGGGCAGGGCGGCAAATAACTTGGCTAAGCTTG
Common_primer AATATTGGGTTGCTCTGATACCAC
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro C C
Population Linkage Group Position
AL2010 E_02 93.3
ALF2 AL02 99.1
LW2010 E_02 79.5
LWA2010 LWA_02 79.033
LWAE2012 E_02 79.051
LWF2_2022 E_02 108.7
DB Program Definition E-Value
EST Name Species Strain