+Marker Data: SOL5002

Crop eggplant
Population LWA2010
Linkage Group LWA_10
Marker Type SNP
Map Position 58.961
Annotation
Source Name PED04I17A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GAGCCTAAAGAGGCATTGAGGGTT
STS_primer_rev AATCGCTTCCACAAGCTCCTCTTC
amplicon_seq TTTTAGTCTCATAAAAAATCATTGAGGGTTAATGTTCTCTTTGAACACATACAGAAGATGTTGTCCGGTGACACTGCTGTGATTGCTGAGACAGGGGATTCATGGTTCAATTGCCAGAAACTTGAACTGCCCAAGGGATGTGGGTAAGCTCCAAACGACAAGTATTCACGTTTAATGGGTATTTACTTCTGTGATGATGACTGTATTTCATGCTCAGGTACGAGTTCCAAATGCAGTACGGATCTATTGGTTGGTCTGTTGGGGCAACTCTTGGTTATGCACAAGGAGCAAAAGAAAAGAGGGTGCTTGCTTTCATTGGTGATGGTAGTTTTCAGGTAAGAAAGATTGTGTCAACGGAATTCAACACAGAGTTAGCTGTGCTTATCTATTCTATCGCATTCGTATCATCCTGTATTGCAAATACTTGTTGCAGGTGACTGCTCAGGATGTTTCAACAATGCTGCGATGTGGTCAGAGGACTATCATCTTCTTGATAAACAATGGTGGTTATACAATCGAAGTTGAGATTCACGACGGACCTTACAATGTGATTAAGAACTGGAATTACACCGGACTGGTTGATGCAATCCACAATGGGGAAGGAAAATGTTGGACAACAAAGGTGAGGAATTTCTCTATCCCCATACCATTTAACCTGAAGTTAAAAGAATCCTCCGACTAAAGTAATGCATTCTTGTTTTAGGTTCGTTCCGAGGGAGTGGGGGAAAAAAATTTAATAATA
SNP_position 286
allele_1 G
allele_2 C
ASP_primer_S GCGGGCAGCAAGCACCCTCTTTTCTTTTGCTG
ASP_primer_L GCGGGCAGGGCGGCAGCAAGCACCCTCTTTTCTTTTGCTC
Common_primer GGTCTGTTGGGGCAACTCTTGGTTAT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 G G
WCGR112-8 C C

Population Linkage Group Position
LW2010 E_10 56.4
LWA2010 LWA_10 58.961
LWAE2012 E_10 64.613
LWF2_2022 E_10 59.8

DB Program Definition E-Value

EST Name Species Strain