+Marker Data: SOL2149

Crop eggplant
Population LWA2010
Linkage Group LWA_04
Marker Type SNP
Map Position 44.245
Annotation
Source Name SmFL40F08A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TGGCTACTTGGATAGGTGCAAACA
STS_primer_rev AAATGCTAGCAGCTTCCTCCCTCT
amplicon_seq GTATAATCACTGAACCAACTTAAACAAATACAGAGAAACAAACACTCTATAGACTACCTATATCGACAGATGTACTCCAAAACAAGCTAAATCTATCTGCATTTCAGTTCTTGATAAACTTTTAAGACTGAGTAGTACTACAACGTATAAGTTTGCCGGTGCTATCTTATCGTCATTCTCTAGAATCACCTACTCTTTACGGTCAGAGGCAGATCTAAAATTTCAAGAACATGAGTGCACTACTAAAGAAACACCAAAAAAGAATGCATTAATTGGGAATTCATCCTTGTTCTTCTACATAAATAACTCAACTTTCAACCAAGTCAATGATTAAGCCCTTTAATAGCTTTGGTGAAAACAGATAATATTAGATCATTTCAAGAAAATATGTATATAAAATATCTAATTTTCCATAAAAACCATGAGTTCACGATAAATTGTACAATAAATTTGCCCCAGTTTGTAGGTAGTACCCAATCACGTCAAAGAATATATCGTATTGGAAACATACTAAAAGTTTATGCTTTCTCTACAGGTTTTATCCTGGAGTTCCTGATGCACTGAAATTCGCAAGTTCAAAGCTCTACATAGTCACCACGAAGCAGGTTGCTAGAATGTGCACATTCACCTAAAGATAAAAATATTCACCGCGAATACAAGGACATCTTAGTTTTAAAATGTTTAGCAGTTCTTGGGGAATGTGGAATTGGAATCTTTAGAGCCTTGAGATGGACTGTTGAATCTAATATTTATACTCCACTGCCATTTGTAGAGCCGCTTTGCAGATGCATTACTTAGAGGGCTTGGTGGGACAACTATTCCAGCTGAAAGGATCTATGGACTCGGCACAGGGTAAGTTTACATTCATGCATGTGATGTTGGATTGAGCTAACTGCACATCAAAAGACGCGGTCAATTAGCGTTACTTATTTCAAGCACATACTCATGTTTATGCGAATCTTCTTTTTAATCAGACCTAAAGTAAAAGTGCTTAAGCAACTTCAGGAAATGCCGGAACACCAGGGTCTGACACTACAGTAAGATTTTTATAGCCTAAGAACTACTCAAACTTCTTCAGATAAATACTTGGTTGTTGGTTCTACCGCGTGGAATTAAATGCGTCCACTTTTCTCAATTTGCTCAGTTTTGTGGAAGACCGTCTTGCTACGCTAAAGAATGTGATTAAAGAGTCCGAGTTGGATGGATGGAACTTGTATCTAGGTAATTTATCGTTCTCTTGACTTCTAATGTGTCATGTAAATTCATTTTATTTCCTCTCTGTTTGCTTTTGTGGTAGTGGTAAGGTCTGCGTACATTCTACTCTCCCCAGATCCCACTTGTGGAATTCCACTGGTTATGTTGTTGTTGTTTCTGTTTGTTTTTN
SNP_position 1117
allele_1 A
allele_2 G
ASP_primer_S GCGGGCTGTTGGTTCTACCGCGTGGAATTAAA
ASP_primer_L GCGGGCAGGGCGGCTGTTGGTTCTACCGCGTGGAATTCAG
Common_primer AGACGGTCTTCCACAAAACTGAGCAA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 G G

Population Linkage Group Position
LW2010 E_04 42.2
LWA2010 LWA_04 44.245
LWAE2012 E_04 43.567
LWF2_2022 E_04 62.7

DB Program Definition E-Value

EST Name Species Strain