+Marker Data: SOL8622

Crop eggplant
Population LWA2010
Linkage Group LWA_03
Marker Type SNP
Map Position 76.227
Annotation
Source Name PER05H18C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd gaaaggtgctgtcactcctgtcaa
STS_primer_rev ttgcattgctataccacacaaccc
amplicon_seq NNCTCGACTATTTCAAGCACAAAAGCCNTAAGTGTATAACATGTCATTCTTGCTAACATCATCTAGCATAATATAGTAACATATAAAAGAATAAACAAAAATAATATGACTTTCTGTTAGCTGATGNAAGATCTTTTTCTGTGTTATAGGAAGTTGCTGGGCATTTTCCACTGTGGTCGCGGTAGAGGGGATAAACCAAATCAAAACAAAGAACCTAGTATCTTTGTCTGAGCAAGAACTAGTCGACTGTGACACGACACAAAACCAAGGATGCAATGGAGGATTGATGGACTACGCATTTGAGTTTATCAAGAAGAGGGGAGGCATCACAACAGAGGCGAAGTATCCTTATAAGGCTGAAGATGACAAGTGTGACATTCAAAAGGTAAGACTCTGTGGCATCAATAGGATGTCTGATTTTACCAGTCTCGTTTCTAATCATGGCCATGAATTTATCAAATTGGCAGAGAAATTCTCCGGTGGTATCCATCGACGGACATGAGGATGTTCCTGCAAATGACGAGGGAGCACTGCTTAAAGCAGTAGCCAACCAGCCTGTTTCTGTAGCTTTAGAAGCTTCAGGTTCTGACTGGCAGTTCTATTCTGAGGTAAAATGATACACCTTTTTTTTTCTCAAGTTCATAAGTGTTTGCTAGCTATAAATATTTCTAAAACTGTAAATATGGCAGGGTGTATTCACCGGACAATGTGGTACTGAGTTGGACCATGGTGTGGCAATTGTGGGGTATGGCACGACCGCTGATGGAAACNNNNNNNN
SNP_position 516
allele_1 A
allele_2 G
ASP_primer_S GCGGGCGCTTTAAGCAGTGCTCCCTCGTCATT
ASP_primer_L GCGGGCAGGGCGGCGCTTTAAGCAGTGCTCCCTCGTCCTC
Common_primer GAAATTCTCCGGTGGTATCCATCGAC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 G G
Nakate Shinkuro G G
WCGR112-8 A A

Population Linkage Group Position
LW2010 E_03 75.1
LWA2010 LWA_03 76.227
LWAE2012 E_03 82.483
LWF2_2022 E_03 80.0

DB Program Definition E-Value

EST Name Species Strain