+Marker Data: est_pla05p09

Crop eggplant
Population LWA2010
Linkage Group LWA_02
Marker Type SNP
Map Position 33.403
Annotation
Source Name PLA05P09
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CGTGGAGTCCCCACATTGATTTAC
STS_primer_rev CAAGCCTCCACAAATTCCTTCACT
amplicon_seq TCTTGCTTCCGGAACAAAGACTGGAGTGAGAACTAGACTCAAAGAAGAAACTGAATACGATGACACAAGAAGGAATGCCTTACCTCTTCCGGTTCCAACGTTGTAGATTCCCACCTTCCCAGGCCTTGACTTTTCAAGAGCTTTCACATGAGCATCAACCAGATCAGTGACATCTATATAATCCCTAATGCATGTACCATCTGCTGTCTTATAGTCTGTTCCTCTAACCTGCATGACAAAACAAAGACTCTCGGAAATGAGGGCAGATAATAACTATTCATGTTATTCAGTTCCCCTATCCATATGAAACGAATTGCTGATAGAACAGCTCATGTTTTTCTTTTGCTTGTTCTTAAGAATAACAATGGTGACTCTTTAAGAACCAGTTAACTTTATTCACATGAATTTCACTCGTAAGAACCAGATCCTTTTTCTGGTAGGCCTTAAAATGCTTAGCAAACACATGAGTACAGAGATAGCAATTATTGGCTGACCTTAAGACCAGGGATGATTCCACGAGCTGCATCATAACAAGCACCAGAAATACGCCCATGTTCACGAAGTTCAGGCCGGGGAGCTTCACCTAATCTTCCCTCTGGATCAGATCCAATCACATTGAAGTACCTGAATTGTCAGAAAACAATTAGCATTATTTTGACCCATGCCAATTGTGCCAAACATAACAAGTCAACCAATAGTTATCACAAAGATTTCAACCAACGATCAAAGAAGTGCTGCATTAATG
SNP_position 106
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTTACCTCTTCCGGTTCCAACGTTGTAA
ASP_primer_L GCGGGCAGGGCGGCTTACCTCTTCCGGTTCCAACGTTGTAG
Common_primer TGATGCTCATGTGAAAGCTCTTGAAAA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 G G
WCGR112-8 A A

Population Linkage Group Position
LW2010 E_02 32.2
LWA2010 LWA_02 33.403
LWAE2012 E_02 33.485
LWF2_2022 E_02 52.4

DB Program Definition E-Value

EST Name Species Strain