+Marker Data: SOL1004

Crop eggplant
Population LWA2010
Linkage Group LWA_02
Marker Type SNP
Map Position 35.332
Annotation
Source Name SmFL10K19C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd AATGAAAAAGCTGGATGGAGAGCC
STS_primer_rev CTTAACAGCATGGCCTCCCATTAC
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGCACAGGTGAAAATAGGAAAAGATAACATATAAGAGAAAAGAAACTAAACCAAGTCAGAAATTTTCAATTTCACCAGAAGAGACGCATGCTCACAAGGACACCATGCTGAGGTAAATGCAAGAACAAAATAAGCAGTCTACTACTTAAGTATGCACCTATTGACAAACAGTATATTTATGCATAATGACAAAAATACCCCAGACTAAGATATTAGTACATTTAAATAATGACCTCAAGATATTATGCGTAGTACATTCAAACAGATCATTCGACTTTCCAACGGGTACTTCTTCATAGGCATGGACATAATTATCCAGGAACATTAATCTTCTACAGATCACTAATTGGCAAATATTTCCACAAACAAGGTTGATGGTAACATTAGAATTCAGAAAGGTAAAGTTGGTGACCAATTATTTTGAACTCTATTTTGCAGCTTATCGACAATTATTTGACAGTTGACAAGAGAGAGAAAGTAATTTCAATTATATTTTTCTATTTAATACAGCCAAGCATTATTATTGTTCTCACATATGATTTGTAAGGATATCACATTAAAACAATTAGAAAGGGGTTATTTGTAATTTTAACTGAAGTTTCTCAAAGTACATTAGAGTTAGCCTGAAATAAGTTGTCCCAAGTCAACAATATCGTTGGGTAGATAGAGAATTGCACTTCGATTGTTGCTTGGGATTGAGGCATAGTAGTTGTTGTTGTTGTTGTTTAACAGGCTCATGCAACATCCAATTTTATATCATATAATACAAAGTGTACCCAAAAATCAAGATCAGAACACTTTACTCCCTTCCTCTATCATTCTTACCTCGTAAACAGTAAAAGAGACCTCAACTGGTCCGTTCTTGTAAACTTCTGCCATGATACTGTACGGATCGGAGCTGATCACGTATGCATTGACACCGAAATGCTTGGACTTACTCCAGAGTAGATTCTCTTTAACACACTTCCTCTGGNNNNTGGGGGTGGGATATGCAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCNNNNNNNNNNNNNNNACCAGATTNNGTCAGATCACCTGGAAAGAGNNNNNNGCAAATTCAGGAGGAAANNNNNNNNNNNNNNNNTAGAACNAAANNNANNCNCNNNNNNNNNNCCGCAAAANNGTNNNGGTGNANGANNTNNNNNNNNNNNNGCATTNGCANNNNNNTGNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANAGTGCNACNNAGTTNGNCCAANNNNNNNNNNNANCAAANNNNNNNNNNNNNNTNNANAGNTTTNNNTNAGTNNNNNNNNNNNNNNNNNNNNNNTCACCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAANCTGNGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 678
allele_1 G
allele_2 A
ASP_primer_S GCGGGCAGGGGTTATTTGTAATTTTAACTGAAA
ASP_primer_L GCGGGCAGGGCGGCAGGGGTTATTTGTAATTTTAACTGCAG
Common_primer TGTTGACTTGGGACAACTTATTTCAGGC
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 A A
LS1934 G G
Nakate Shinkuro A A
WCGR112-8 A A
Population Linkage Group Position
LW2010 E_02 34.1
LWA2010 LWA_02 35.332
LWAE2012 E_02 35.955
LWF2_2022 E_02 54.1
DB Program Definition E-Value
EST Name Species Strain