+Marker Data: SOL8240

Crop eggplant
Population LWA2010
Linkage Group LWA_01
Marker Type SNP
Map Position 29.621
Annotation
Source Name SHT06D12C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd atgagattccccttggttggaagt
STS_primer_rev ctgtgcagcttgaaaccagttcat
amplicon_seq CAATTGCGTATCCCAAAAATGCGCTTTTAAAGTATTGAGGCTCCTTCCCTCTGGAGACATCAAACCGGAGTGCCAATGCCACAAAAATGCCTGAATAACAGGATAATTACTAGTTTATGACAAAAACTAAAATAATGAGAGGTAAGAAACGGAGCAAGTTCACCGGTGGAAAAAGTCCATTGCAAATTCATAAATTGCCTTTTGTAGACAGGTCACTTAAAAGCAACATGTCTTTATGGTAAGAAGGATGTTATACCAGGAATTACAATATCCCCGAGACCAAGCATTGAAAAAGGACGCTTCAAATCCGCTGTGGGGAACAAAAGCTGCAAAAAGGAAACAAAAAGCAAATTCTAATTACATACAGTAAAAACGACAGAAAAGGTCAGAATTGACAAATTGGAAGATAAGCTATATGAAAAATAATCACTATACGCACCTTGATGGGAGCATCAAAAGACTTAGCAACACTGACCATCACTGGGGTAAAAAAGACCCAGAATATGTCATATACAAAAAGTCCAGCCTGCAGTAAAAGAACATAGGGTTCATTCAGCACAAAGACGGTAATTTAATATAGAGAAAGTGCCAGAAACGACGTCACACACAAAAAACCTCAACAAACTCTTCTTAATTCTTGTCCAACCATGTATTATACACTGGAAAAAGGATGTGTTTATGCAATGCACACTTGGGAGTCCCACTTCAACTATTAAGTTGTGCTGTTTGAGCCCAGTAGGAATAAACGAATGACACCTCTGAGCTGTGCACAACTAAATATTCTCCCTCTGTCCCAAATNAGTATAAACAACAACAACATACCCAGTGATCCCACAGTGGGGTCTGCGAGNNTAAATGTNNNNNNNNNNNNNNNNNNNGCATAAAATGNAAGCAGATCNATGNAAAATCACTATTTCAACTTCAAGTAATCCAANTCAATTTCTACAGNTCATCAGACACACAACAGTAACGGAACTGGCTGCAACAATGTGACAAGCTTTTGTTAATAGAAATAAACATTCAATTCAGTGTTCAACCATCAGAAGGAGAAAAGACGATGTGAGAAGGTTGTTTCACGATTTCAAAGCAACAGATAAAGTAACTGTGCTAGTTGTGCAGACAAACCTGAATAGAAAATGCAAGGCCCAATACATTGTTAGCTAGCCAATGCTTCTGTTTCGCATACCATACACAGAACATAGTTCCAGGAATTGCAGCAACAATATGGGACCTTGTGAACTCAAACTCCAAAGCTGAGAAATAAACAAATAAACATCATCTCCAGAGAAAAGAAAAGACAGAAAACCGACAAATTCCAGTCAAAGACGTGAAGATGTACCACCCAGTGTGATATGATATAGAGGGAAAATGCCATTAATTAATGATTGAGATGCTACCAATGAAATTATATTACTTCATTTTTAAAAAAGGGGAAAAAAAGGGTGGTCCATACAGCGGAAATATGGGAAGTGCCATATTATGAGATCTTCATTCCACTTTTTCGGCAAGAATCGTTTGATAGCAGGTAACAGTGTTGCACTGCAAAGCCCCAAAGAAAGGGATGATATAAATACATATAACGAAACTACTTCTTAGAAAATTGCATAAGAATATATTAAGCATAGTAGAATGATCCATACGGAAAAAACATACGAAAAAGCAGCAATGCCAAGTACAAAAAAGTAGCACGTCAATACAGCATTAACCAGGTCTTCGAGAGGAACTAAAAAGCAN
SNP_position 228
allele_1 A
allele_2 G
ASP_primer_S GCGGGCGACAGGTCACTTAAAAGCAACA
ASP_primer_L GCGGGCAGGGCGGCGACAGGTCACTTAAAAGCAACG
Common_primer TCTCGGGGATATTGTAATTCCTGGTA
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
AE-P03 A A
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 G G
Population Linkage Group Position
LW2010 E_01 34.2
LWA2010 LWA_01 29.621
LWAE2012 E_01 32.925
LWF2_2022 E_01 161.3
DB Program Definition E-Value
EST Name Species Strain