+Marker Data: SOL7466

Crop eggplant
Population LWA2010
Linkage Group LWA_01
Marker Type SNP
Map Position 85.049
Annotation
Source Name AE003I20C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TTCTTGGTCTTTTTGGAGAGCTGG
STS_primer_rev CTTGGTGGTATAAGGCAGCAAGTG
amplicon_seq NTNCTTTCTTGTTCCTTTACATAACTGTATTGACTGTTATGGGCTATTCAAGGGCTAATAGCAAATGTAGTACTGTTGGTGTTCAAGGCATTGCTTGGGCTTTTGGGGGTATGATTTTTGCGCTTGTTTACTGCACTGCTGGCATCTCAGGTATACATATATCTATCTCACTCTTTTTTGACATCCATAGTATATGTATTTGCCTAAAGTTGTGTGTTTGGCTTCAAAGTTGTAGTCTTTTATCATGTTCTTTAGTGGTGTTTTGCTTCAAAGATGAGAGCTCTATTGTGTCCTTTTTACCTCTATAGGCCTAAAACTGTGTGTTTAACTTCAAAGTTTCTGTCTGTTACTATCATGTTGCTTAGTGGTATTCTGTTTCAAAGATGAGAACTTTCATGTGTTTTTCTGACTAATGAAGCAGGAAAAAACAAAAAAGTAGTCTTTACCAGCTTTTGAGTTTGTTGCATTTAGTAATTAGTACTCCTCTAAAGAGTTTCATAATACATCAAAATTTACCATTTCCTTTTGGACCATTTGGAGAATAAAAAATTCTTTTTTGGTTTATCGTTTTGTATGTAATGTTTGGATGCAATCATATCTAGTTTATTTTGTTTATGGGTTTTTGAGACTAGGATTCTCANGAAATAACCTCTCTGCCTCTGTGAGGCAGTGGTATGTTGTTGTTGTTGNNNATTGCGATCATACCAACACTATCGCACCAAACCCCTTTCTGAAGTTAAGCGTGCTTGAGCGGAGTAGTACTAGGATGGGTGACCTCTTATGAAGTCCTCATGTTTGCCATCATGTGTTGTGTTAGTTATTAGTCACTCTTCCTGTTTTCTTTTCTTTTCCCTCCCCTTCTTTGATATCTAGTTTATTCTGCTTATGGGTTTTTGAGACGAGTGTTCCCAAGAAACAACCTCTCAACCTCCATGAGGTAGTGGTAAAGTTTGCGTACATNNNNNNNTCNNNNNNNNNNNNNNNNNNNGNNNNTGAGATNATTGGCACTTTTGTTCTTGTCTACACTGTCTTCTCTGCTACCGATGCCAAGAGAAATGCCAGAGACTCCCATGTCCNTGTGAGTACTTATAGGCTGATTTCTCATTTTGTGCTTCAGATTTTACTGTTGAGCTAATTAAATGGACAGTCGGGTACCTAAATGACGTGAAAAAAGACCAAATAGACCAAAGCAATGGACAGAAACTACCATTAAACGCACTAATTTTTGCATTGTACAAGAATGAGTTAACGTCCCTCATTAAAATCACATATGTAACTAACTCATGGTTATGTTTTACAGATTTTGGCTCCTCTTCCAATTGGATTTGCTGTGTTCTTGGTTCATTTGGCCACCATCCCTATCACAGGCACTGGCATTAACCCAGCTCGAAGCCTAGGAGCTGCCATTATCTACAACAGAGAACATGCATGGGATGACCATGTAAGTTTTACCTTTATGTATGAATGGATGTAGTCAACATGCATGGGATGACCATGTAAGTTTTACCTTTATGCATGAATGGATGTAGTCAACTTATACTATTTGAATGGAGTATATTATTTCTTAATAAATATAGTTATACTAGATGACTAACAACAAACATATCTAGTGTAATCGCACAAGTAGGGTCTNGTCAGGTAGAGTGTAAGCCGAACTACCACTACCTTGTTGAGAGAGNGAGNGGTGTGGTTTTTGATGGATCCTTCAACTCAAGAAAAGCAATTCAAAACAATTGGAAAAAAATAAATAGGATGTGAAGAAGCCATGGTAAAACAAAATAAACAAAGCATGACATAATATGCTGACATGCGCGATAAGGATTTGTAGATATGACTTAAGACATTCATAGAGTCAGTGACAACTTGTTTGAGATCGAGGCATAGTTATTTATTTTAAGTTATTTTCTTGATTTGTTCTTTATTTTGAAAATGCAGTGGGTTTNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 858
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTCCTGTTTTCTTTTCTTTTCCCTCCCT
ASP_primer_L GCGGGCAGGGCGGCTCCTGTTTTCTTTTCTTTTCCCTCACC
Common_primer GGGAACACTCGTCTCAAAAACCCATAA
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 C C
LS1934 C C
Nakate Shinkuro C C
WCGR112-8 T T
Population Linkage Group Position
LW2010 E_01 103.8
LWA2010 LWA_01 85.049
LWAE2012 E_01 88.218
LWF2_2022 E_01 81.5
DB Program Definition E-Value
EST Name Species Strain