| Crop | eggplant |
|---|---|
| Population | NAF2 |
| Linkage Group | NA07 |
| Marker Type | SSR |
| Map Position | 0.0 |
| Annotation | |
| Source Name | EMB01A03 |
| Source Type | genomic |
| Source Sequence | ATCCCCGATTTAAATTCAATTAGTGTACATCACACACTAG GGGATTCTTTGATGGATGGTTAGAGTCGTCAGATATTAAT AATGTAAAGATTAGTTATGGACGGATTTAGAGGACGTTTG GATTGGCTTTTTTAAAAATAGCTTACAAGCTAAAAGCCAT AAGTTGGTACCAAGCACTTTTAGTCAATACAAACACCCCT CTTCGACTATCACTTGTGCATTATATGCATATTCTAAAAA ATTGAGATACTCAATTTAGAAAAGACACCGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGGAGGGGGGGTCATTTAAGCC AAACTAACAGCTGAGCTCCACCAAGAGGAGGAATTTTGCC ATCTATATGAAGATTGTTCTGAAAAGCCAATTGAGATGAC ATTGTACTCTTGGGAACAAATGGACTTGCGTTCCCAAGCA ATGGAGATGATTGATTTTGTTGGGAAACAAAGGAGCCATG ATCACTGTATATCANATCTGAACAACTACCAAAAAAGGTG GGAGGAATTAGATAGCTCAAAGTGCATTTTAAGTGAAAAC GTTTACAAATCCACATTGTAACCCACTAACAAACAACTCT ATTTTTATTTTTTTTTTAAAACTAGTAATCTGTATTCCTC AACATTAAGGGCTATGCTGGAAG |
| Developer | NIVTS |
| Document | Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153 |
| motif | (GA)15 |
|---|---|
| PCR product (bp) | 242 |
| fwd primer | |
| fwd primer seq. | cggatttagaggacgtttggattg |
| rev primer | EMB01A03pt |
| rev primer seq. | gtttggtggagctcagctgttagtttg |
| fluor. primer | |
| dye | FAM |
| fluor. Primer seq. | FAM-CGGATTTAGAGGACGTTTGGATTG |
| PCR condition | 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C |
| polymerase | Roche Taq |
| Line | allele-1 | allele-2 |
|---|---|---|
| PI 286106 | 237 | 237 |
| Population | Linkage Group | Position |
|---|---|---|
| EW2009 | LG02 | 106.3 |
| N28F2 | E_07_01 | 1.1 |
| NAF2 | NA07 | 0.0 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
