+Marker Data: SOL5197

Crop eggplant
Population NAF2
Linkage Group NA07
Marker Type SNP
Map Position 106.1
Annotation
Source Name CAL06L23A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TAGCTACCCAAGTCAAACCTCCAG
STS_primer_rev CAAAGTCGGCTGCATAAATCTCAA
amplicon_seq CCCCTTTTAGTTACCCCCAATCAAACCTCCAGGATTATGGTTGAATATCCAGGTAAGCATTTGAATACAGAATGCTCTTGGTAATCGCTTGTTGTACATTCAGTTTTTCAATCTCATAGAATCTAAAAGTAACACTTTGATTATCACACTGTGCTCTCCTGCATTTGATGTGTGGTATGTTAAATTTGTGTTGGGAATAACAATTAATCAACTTTTTCTTCTTCAAATACATTTCCAGCATGATTCCTTCTACAGCCAGCACAATCTGAGTATGAGAAGCTTTGTTATTTCCCTATCTAGAAGTGTTATTGCCAACTATATTTCATCACCTGAGGTGAATTTCCTCCGAAATATCGCATCACGATTGAATCCACGAGTGACAAAACGCATTTTCCGGTTTCTCAACGAGGATGATATCGAGCCATCAACAAGTCAAACATATGGTTCTCTAGCAAAGAATCTCACATTTATTAAAACATTTGCCGCTGGGATTCTTGTTCCCAAGCACTATATCTGGCCAATGGACAGCAGCATGTACTTGCAGCCACATACCTCGGTCGTTGCGAACGCTCATAAGGAAGGTCTTGAGATTTGACCCCCACACATAGTAGACAC
SNP_position 116
allele_1 A
allele_2 G
ASP_primer_S GCGGGCTGTTGTACATTCAGTTTTTCAATCTCA
ASP_primer_L GCGGGCAGGGCGGCTGTTGTACATTCAGTTTTTCAATCGCG
Common_primer CAAATGCAGGAGAGCACAGTGTGATAA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
LW2010 E_07 92.0
LWA2010 LWA_07 90.946
LWAE2012 E_07 86.443
LWF2_2022 E_07 100.4
NAF2 NA07 106.1

DB Program Definition E-Value

EST Name Species Strain