| Crop | eggplant |
|---|---|
| Population | NAF2 |
| Linkage Group | NA06 |
| Marker Type | SSR |
| Map Position | 90.4 |
| Annotation | |
| Source Name | emf01P24 |
| Source Type | genomic |
| Source Sequence | NNCTACGGCAAGACACCCTTCGTCGGAAACTTACACTATA TATAAGTCAAATCTTAATATTACATAGTATTTTCAATACC TTTAGAAGCAATGTAGACCTGTAGCGCAGAGGCAAAGGTA TGCTCAAGACTTATGTAGCACCCAGGTTCGAATCCCTGTA GAGTAACCTCCTTTTTTTTTTTTTTTTGTGTGTGTGTGTG TGTGTGTGTGATGAAGAAAACAAGAATGACAGGATGGAGA GTTGGTTTCTGTCTTACTGCAAGCTTCTGCTAGCAAGGCC ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN N |
| Developer | NIVTS |
| Document | Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153 |
| motif | (tg)12 |
|---|---|
| PCR product (bp) | 161 |
| fwd primer | emf01P24/U |
| fwd primer seq. | gaagcaatgtagacctgtagcgca |
| rev primer | emf01P24/L |
| rev primer seq. | ccaactctccatcctgtcattcttg |
| fluor. primer | emf01P24/U_NED |
| dye | NED |
| fluor. Primer seq. | NED-atagcaatgtagacctgtagcgca |
| PCR condition | 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C |
| polymerase | Roche Taq |
| Line | allele-1 | allele-2 |
|---|---|---|
| AE-P03 | 159 | 159 |
| EPL-1 | 167 | 167 |
| LS1151 (S.linneanum) | 157 | 157 |
| LS1934 | 159 | 159 |
| LS4021 (S. incanum) | 162 | 162 |
| Nakate Shinkuro | 168 | 168 |
| Senryo 2 | 159 | 159 |
| Shironasu | 158 | 158 |
| WCGR112-8 | 159 | 159 |
| White Egg | 158 | 158 |
| Population | Linkage Group | Position |
|---|---|---|
| EW2009 | LG04 | 13.4 |
| NAF2 | NA06 | 90.4 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
