+Marker Data: SOL4154

Crop eggplant
Population ALF2
Linkage Group AL01
Marker Type SNP
Map Position 147.3
Annotation
Source Name PER06C06A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GATCCTGCCATCTTTCGATTCTGT
STS_primer_rev GATGGCATCAAGCCTCTTCAAAGT
amplicon_seq TAGCTAATGCTCTTGGTTATTTTCTAGTCTCTCTTCTTTCAATTTGTCTATCCAGCTAAAAGCTTCCTGCATGAAGACATTTCTTCTGTCACAGTTGATAATTCCTTTTTTTTAACTAATTGGACTTCCAATTCTTGTTCTTCCCATCTATTCAATTTTTGAAAAAGTGTTTCTTATGATGGAACTTTATGTTCTATGTTTGGGGAAGGGCTGATTCGACGGAGTTTGCTTCAGCAAATTTGGTACTTCCAGATTGTCTAGTTGTCATGATTGATATTCATGCTTTTTTAATTGTCCATAGAGTTAAATGAGGTGAATGAATAGATAGTGTACAATTCCCTGTAATGATCAAAAAGAAAAATAGATCGTGCACATTTCTTTAAACATGAGCTTGTAGGCTGGGAAGAAAATTTTCTTTTTTTACAGTTTTTATTAAGTTATATACCTTTTACAGCGTCCAGAAACATTGTTTTTACACAAATTTGCTAAACACCCTGCTTTTGCCTTGTTGTATTGTCTAATGGTATTAGGTCATGGCAATTGGGACATTAGCTATGTGCTACAACAACATTGAAGTCTTCAGAGGAGTGGTAAAAATGAGGCGTGGTAAGAACTATGATTGTCAACATGCATTTCTTGTGGCTTCATATCCAATTGCAATCTGACCCCTTGAAGTTCAGCCAATTTGTTTTTGCATCCCATCCTTGGATCAATAGCAATATTTTCACATGCAAAATGACTTTCTTC
SNP_position 221
allele_1 G
allele_2 A
ASP_primer_S GCGGGCAGTACCAAATTTGCTGAAGCAAACTCT
ASP_primer_L GCGGGCAGGGCGGCAGTACCAAATTTGCTGAAGCAAACTCC
Common_primer TATGTTCTATGTTTGGGGAAGGGCTGA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_01 166.4
ALF2 AL01 147.3
LW2010 E_01 167.3
LWA2010 LWA_01 140.585
LWAE2012 E_01 138.28
LWF2_2022 E_01 8.2

DB Program Definition E-Value

EST Name Species Strain