+Marker Data: TC5038

Crop pepper
Population KL-DH
Linkage Group KL08
Marker Type SNP
Map Position 62.71
Annotation
Source Name
Source Type CaGI.release_2
Source Sequence
Developer NIVTS
Document
typing_method Tm-Shift
Marker_Class misc_cDNA
STS_primer_fwd AGCTGTTGCAGCTATGGATTGT
STS_primer_rev CTCTCTCCAAGCTTCATGATCAGC
amplicon_seq NNNNNNNNNTTTTGTTCCCTCTTTGAGGTTCGCTCGGGAGAAGTACATGGTTTTTCCTTTAGTTTATTTTCGAATCATTTGAGTTGCAGAAATCATGCAAATAGAATATTAATCCAATGATTGCAGATTCTTATCTCAATATGTTTCCTTAATAAAGATTCCTAGATAGCAAAAGTCAACAGTTTTTACAGTACAATAATGTTGAATGTATCATACCGTACCCGAGAGCATAGCTATGAACTGTGTGTAATATGAAGAGAAATATTCTGGCACAATTTAATATTTAAAGGATGTCACACAACAACAAATTGGCCATTGTTTATCCAAATCTAAAAAGATTTTTGTTTGACTGTTATTTCCTATAAAGCTGTAGAGTTACACTTACAATTACTCAATTGGTAGACTTATATTGGCTATGCGGTTAAATTACTTAGTTATGAAGTAAATGTGACCATGTAGTCAACCATATTCACCAAGATGCATTAGCTATTTTTCAAGTCATGTTCATTCTTCATTCATATATGTTGGAGATTATCTTATGAATATCTCGCCACTTTATGATTATGTGGGAAACCATTTGAAATTTTTGTTGTGGGAACTTCTGCAGGACTGCATAAAGGTTTTGCAAAGAAAGTTTCCAGGGAGCAAAAGGGTTGGTGAGTTCTCTTTGATCTATAAATATGTATGCTTGTGGTCTTGATTTTTGTAGATTGCATTTTCTTCACNTGTGGCNAGCAACTTGAATCACTGTGTTGGTACAGCTCATACCAGANTANCAGANTTGTTATTGTCAGCTGAATGATGANGATGACCTTTTTANNNNNAGNNNNNNNNNNNNNNNNNTGNNNNNNNNNNNNNNNNNNNGGGANNNNNNNNNNNNNNAAATGCTACTCAGCTTTTGAGAAAATCATTTGATCAGGTCTGAGATAGACAAGGACATTTCACTTACATTGTTAATTTGGCTCAGTTAGTTTACTNGTAAAATAGACAAGTCCTATGTGGAAATGTGCCCCAAAATAGTGTATAGAGATATAAAGTTAAAATCTAGTATAAGAAAACTAGCCACTAAATTTGAATTAGAAACTCAGAAGTGCATCTTTGCATCAGAATTATAATTTTAAAATGTTTCTTTAAACTTGCTGTTGACAATATTTATGTTACTCGTAATTTTTCAGGCTTTTCAATTCCTTATCCATATAATTGTTAGTTATGTTCACAGTAGTTTTTTCTTATAGTACACACTCACACACACAGAGAATATGTATATGTTCACACAGTAACATCTGTACATATTATGTGTGTCTGTATATTCTCGCTATCTGCACCTTTTTTTCACTAAATCATGTGTTTTCATTGAGCATTGTTTTTAAAGCCTTTTTCATNATACATTTTTTGCTTTTGACAAAGTTGGTGCATGCATAAATCTATATGCTCATAGCATTGACCAAACATATGTGCTCATGGCAGAGGCTCTGTGATTACTCTCATATAATTNTAAGAAAAAGAAAAACAATCCAACACTAAAGCAATAAGTTTCTCTGTTCTTATTGATATCTTAGATTGTACATAAGAGGAGGGTAGCCATGGCAAAGGCACAAGGCAATACATCAGCAGCAATTGACTGGCTGAACAAGTATCTTGACTTGTAAGTTGTAAGAAGTATCTAAATGGGTCACATATTAATACTAGTAAATATGTTGCGACTTCGACGGTTNNNNNNNN
SNP_position 1383
allele_1 T
allele_2 C
ASP_primer_S GCGGGCAGCATTGTTTTTAAAGCCTTTTTCATT
ASP_primer_L GCGGGCAGGGCGGCAGCATTGTTTTTAAAGCCTTTTTCATC
common_primer TATGCATGCACCAACTTTGTCAAAAGC
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
Population Linkage Group Position
KL-DH KL08 62.71
KL-DH_2024 KL08 62.71
KL-DH_2024_R2 KL08 62.71
DB Program Definition E-Value
EST Name Species Strain