+Marker Data: TC5522

Crop pepper
Population KL-DH
Linkage Group KL07
Marker Type SNP
Map Position 127.21
Annotation
Source Name
Source Type CaGI.release_2
Source Sequence
Developer NIVTS
Document
typing_method Tm-Shift
Marker_Class misc_cDNA
STS_primer_fwd ATATTTGGAGCGCAGGTGTTATGC
STS_primer_rev TCGATTGAGCCATTTCCATCTACA
amplicon_seq NNNNNCCTTTTGGGCAGGTAAAGTCATCCGCTTCGCTTCTCATTGTCTGAGATAATACACAGATGGAAATTGTTGTCACTATCTAGTATTCAAGGACTTACAGTCTCTATTCGTTTGATATGCAGAAACCGAAAAGGGTATATTTGATGCCATACTTAAAGGGAACATTGACTTTGAAAGCGAACCTTGGCCCTCTGTATCTAGTAGTGCCAAGGACCTAGTACAGAAGATGCTGACTAAAGATCCAAAGAAACGGATTACAGCTGCACAGGTTCTTGGTATGTAGGCTTTAAACTATAGGTTATTGATTTTAAGTGTGCTAACAATTTCAGTAGAGAGCTTCCATGTTATAGATTGATTAGATTTAGAACTCGTTGAAGATTTCCTTTCTGACACTACCACACATATTTGTTTCTTTTGGAAAAGAAAAGGGAGTTGCATTTGTATTAAGAGATAGTGTACTTCTAACAAAATTTGGGCACTTGCAGACTCCCTCCTTTCTAGCAGTTACTCAGAAAATTATTTAAGACAACGCAGTATCCTTTAAGTCGACATCACTCAGCAATTAGATTATTCTGCTTTGTCTCACCCAAGGGGCCTAACTGCTTTCCTTTGCAAGATCTTACTTTTATCTTTGATTACTGTTGGCATTTTGAACTGGATTTGTTATCAAGTAAAGCACAGCTGCTGCTTCTTGTGAAAGGAGTTAAACATTGCATACTTGATGTGGCCAGACCAAGTCCTTGCTGCCAAAATTAGTTTNGTATAGATATCANTCTTTTTNCTGGCCTGTAACAGCGTCATTTNCTAGCTTTANGGATAATGCCAAATTATTTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCATCGACAAACCATTAGAGGGTGCTGTCCTGTCANGAATGAAGCAATTCAGAGCTATGAACAAGCTCAAGAAACTTGCTTTGAANGGTAATCTTAGAATTTGTCAACTCTGCTGTAGTTGAATCTATGTAAAGGAAAGGGGGATATAGGGTATATTTTCTAATTTCTTTCGTGGACTCTGTTTGTGATGAAGAGAAAAGGACCACCTTTTTGCATGTACATTGTTCCTCATACGATAATCTTGTACTTCACATGCAAGAAAATTATTTTTTTCTCACTTATCTGCTTTAATCTCACATCCTTACGTTCCTTTCAAGCAAACAATATGTGAAGAACATGATGAGATTTAGCATGAGCTACCATAATTTTTGTGAATTTGGTATCTCGGCTTCTTTCTTACTCATAGTTGTGTGCAGGATTATTTGTCTGATAAGGATAAACATAGTACACCTAATTGTCTGTTGACATTCTACTCTATTTTGTGGGCTCGTGTATCTTCCCTATTTCAAATCCTATGTCCGTGTGATAGCTACCTTCATCTTCCTTCTGCAAGTAATAACACATTGCACCATCCGTCATTGGAATTAGGTCATTGCCGAGAATCTCTCTGCAGAAGAAATTCACGGGCTCAAAGCAATGTTCAACAATATTGATACTGATAATAGCGGCAGTATCACTTACGAAGAGCTGAAGAATGGATTGGCTAAACTTGGGTCAAAGCTCACCGAGGCTGAAGTCAAGCAATTGATGGAAGCTGTAAGGCAGAACTCCTATAAGTTATTGATGTTCTTTTGCTCACNTAAATTACTGAAATTN
SNP_position 518
allele_1 A
allele_2 G
ASP_primer_S GCGGGCCCCTCCTTTCTAGCAGTTACTCAGAAA
ASP_primer_L GCGGGCAGGGCGGCCCCTCCTTTCTAGCAGTTACTCAGAAG
common_primer TGATGTCGACTTAAAGGATACTGCGTTG
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
Population Linkage Group Position
KL-DH KL07 127.21
KL-DH_2024 KL07 127.21
KL-DH_2024_R2 KL07 127.21
DB Program Definition E-Value
EST Name Species Strain