+Marker Data: TC3645

Crop pepper
Population KL-DH
Linkage Group KL07
Marker Type SNP
Map Position 113.38
Annotation
Source Name
Source Type CaGI.release_2
Source Sequence
Developer NIVTS
Document
typing_method Tm-Shift
Marker_Class misc_cDNA
STS_primer_fwd TGTCATGATTCTTGGTCCAACACAG
STS_primer_rev ATATAGGCGCGTCCACTCCTTAGC
amplicon_seq NNNNNNNNNNNNGAATNAGCAAGAAACTGTGCTTGCAACATATACTTGTTTTGTTGAGCTGTCATATTGTGTGGTGTACATTGACTCTGTTTTGCTGAAGTCTGAACTGGCCACTTGGCTGGTGTATTCTATTGGCTAAAGTTTCTCTTTGTTGTTCATCATTTTACTTGTGTATCGATTGGCCCAATTGATCTCCATTTACCTCTAATTTGTTTTTTCCTCTTCCTTTATATAGTCTTGGGCACTTATCTTCTTTTCCTGTAGCTGCATACTATGTGAACCAAACATGAAAACTGGCTAATATTACCAGACTAATTAGTCCTGCGGAATAGGAAGTTAACCTGACTAGTTGATAACACTACTGACGGTGAGATCTGGAACTGCATCTGGAAAATTTGAAGTAGTAACCTTTACTAACGTTTGCAACTCCTGGTAATATGAGCATCACTGTATTTGTGTTTGCTATGAATTTCTTAACGTTATCTGGATTCTCAGGAGCATAGCTGAAATCTGGCTGCTGTTAGTTTAAAACGTTGAATATTGATGTCTAGTAGAAACGGTTGCTAACGGATAGCATTCAGCTGCAAGACACCCATCAACCACCTTCTATTGTTTTGTGATATGCATGTTTACAACGTTCTTCTCTTTTAGCTCTTCTAAATTTCCTTGGTTTTGTTGGACAGTGATTTAGATGATGATGCTAGAGGCGTATTTTGAATAATATATGTTCTGCCTGCAGTATGCTTTTCCTCTTTGTTTCTCCTTTNACCTAATCGGCGTACCTTNCTTTCTGTAGGAGNTGTCTTCAAGCTCGAACTNATTTTNGCNTGAAGAGTACCCAATGGNNGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTGNTGGGGTATGATATGCAACTTTCCTGGGTGCTNTTCATGATATGTTTCTGGATGATGTACCTGGTGTGCTNAGTCTTTTCAGGAAGCTNACTTTTCAAATGATTGTGGACTTCTACTTAAATAGAACATGTACCCTTGATCTTAATAGTTGCAGATATTATTTGCTTGTGCAAGTTTGTTGTTTTATACGTTTAAACATGTTGTAAAGTTTTGCTATGTGTATACTGTCGGTTAGTCATTGATCAACTTGCATCCCAACAGGTTCGATTCCTCACCAAAATCTACCATCCGAACATTGATAAGGTTTGTTGTGTTTATCAACTCTTTCATACATGGATATAAGCCACAAAAATAAAATACCTTTGCTTATGTATGTCTTTGATGTGAAGCTTGGTAGGATATGTCTTGACATTCTTAAAGACAAGTGGAGTCCTGCTCTTCAGATCCGTACTGTACTTTTGAGGTATTCAGTATTTTATCATGCTTTGAAATATTTTTCTCATCTCTCTGTATGCACCAAAAGATGCAAGACTGATGAATACTACGAAAATGAGAACCAGACTAAGCTTTCTAAGGTGTTGGAACTTTAAAAAGTTTATTCATGTTTCAGCATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAAAACATCGCAAAGCACTGGAAGGCAAATGAGGCTGAAGCTGTTGAAACGGGTAAATTGTGTTGTGGTCTTTCCATTTACTACTGCAGAAGTAGAAAATTAGCATCTTCTGGTTATGCAAATCTGTATACACATTTTCTCTTCGATCANNNN
SNP_position 418
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTGCTCATATTACCAGGAGTTGCAAACA
ASP_primer_L GCGGGCAGGGCGGCTGCTCATATTACCAGGAGTTGCAAACG
common_primer TCTGGAACTGCATCTGGAAAATTTGAA
enzyme Stoffel frag.
dye EvaGreen
Line allele-1 allele-2
Population Linkage Group Position
KL-DH KL07 113.38
KL-DH_2024 KL07 113.38
KL-DH_2024_R2 KL07 113.38
DB Program Definition E-Value
EST Name Species Strain