+Marker Data: es811TC7264

Crop pepper
Population KL-DH
Linkage Group KL05
Marker Type SSR
Map Position 41.96
Annotation
Source Name TC7264
Source Type misc cDNA
Source Sequence AATTTTCCCAATTGAAAAAACCCTAAATCAAGAACATACA TATATATACATACGGAAATGATCAATGGTTATGATGACGA TGCATCAGCATCAGCATCAGCATCAGCATCACCATCACTC CAATGCACCCTCAACTCTTAGATCCCCTAACACTTGTACT CCAAATACCCATCAATTTCCTTCCATCGGGTCACCTGGTT TGGAACTCGGGTCACTACCATTAGCCCGAATTAAGCTATC GGATATCGCCCCCTACGATGGAGCTCCGGTTGGGAATTAT TTACGGGCCGTGGAAGCGCTTTCGGGTTCGCTTATGCGGT ATAATGCCGCGGTGATGGAGATGAGTGGTGAAGGTACGGC GGTGGTAAAGTGTGGGTTGGAGTCTGTTAGGTATTTTTTT AAGACGAGGGGTGTTGCTCAGAATGGTGGAACTGGAAAGA GTGGTCGTGGGGTTTATATATATAGAGCTGGAAGGCCTTT GGAAGACATGGACTCTTCGCCCCCATGCATGACTGAAGTT TTCCGCTGCATGGGAAGGGCAGCTCGTGCTGCTTTATGTG TAATTGCAAGGCATCTTCGATTGCGAAGCGATGTTTTTGA TCACTTGCTTGATGATAATCCATTGCCTGTTAATGAGGCC TCTTCATCCGTTGTTGTTGCAACCTTCTCCAATACCACCT CTCAAAATGGG
Developer Dana-Farber CI/Harvard SPH
Document
old source name pepper|TC7264
typing_method 13% PAGE
motif (GCATCA)5
PCR product (bp) 167
fwd primer
fwd primer seq CGGAAATGATCAATGGTTATGA
rev primer
rev primer seq GGTAGTGACCCGAGTTCCAA
PCR condition 95C_1min->(94_30s->55C_30s->72C_1min)x35->72_5min->4C
polymerase Native Taq
comments QV: estimated by sequencer
Line allele-1 allele-2
K9-11 167.1 167.1
MZC-180 (selfed LS2341) 161.4 161.4
Population Linkage Group Position
KL-DH KL05 41.96
KL-DH_2024 KL05 41.96
KL-DH_2024_R2 KL05 41.96
DB Program Definition E-Value
EST Name Species Strain