+Marker Data: AFES1234

Crop bunching_onion
Population FA
Linkage Group 8
Marker Type SSR
Map Position 43.2
Annotation
Source Name FX564773
Source Type EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2015) Mol Breed 35:55

motif (aag)5
PCR product (bp) 226
fwd primer AFES1234-F
fwd primer seq. agttattgctggcaatttcgtt
rev primer AFES1234-R
rev primer seq. gtttcacagaaggttctttcgtaccc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No.
annotation Os12g0111500 [Oryza sativa Japonica Group] >gi|77553421|gb|ABA96217.1| BTB/POZ domain containing protein, expressed [Oryza sativa Japonica Group] >gi|113648475|dbj|BAF28987.1| Os12g0111500 [Oryza sativa Japonica Group]
similar marker -
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8
F1s-7s-17s-3s-1 229 229
J1s-14s-23s-9
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
FA 8 43.2

DB Program Definition E-Value

EST Name Species Strain