+Marker Data: AFA04D08

Crop bunching_onion
Population FA
Linkage Group 8
Marker Type SSR
Map Position 32.8
Annotation
Source Name AB564782
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ac)4gc(at)3gg(ac)4tcatacaa(ac)12a(ta)6g(ac)4
PCR product (bp) 260
fwd primer AFA04D08-U
fwd primer seq. atcaatcgcactggtggtatgaac
rev primer AFA04D08-L
rev primer seq. gtttgcatgttccatctctacctaacgtg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564782
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 261 261
D1s-15s-10s-8 250 350
F1s-7s-17s-3s-1
J1s-14s-23s-9 250 350
K1s-5s-2s-2s-4s-5 259 259
Chiang_mai 200 300
Kaizuka_Wase

Population Linkage Group Position
FA 8 32.8
KiCF2 8a 0.0
SaT03 8a 86.9

DB Program Definition E-Value

EST Name Species Strain