+Marker Data: AFA17B01

Crop bunching_onion
Population FA
Linkage Group 7a
Marker Type SSR
Map Position 23.4
Annotation
Source Name AB564844
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (tg)3ccatggttttttgtatggtgggcttaat(ac)6ag(ac)14tc(ac)3
PCR product (bp) 172
fwd primer AFA17B01-U
fwd primer seq. agtatggtccaggtttcattgtgc
rev primer AFA17B01-L
rev primer seq. gtttcaagcactgcagagagagttcagc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564844
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 177 177
D1s-15s-10s-8
F1s-7s-17s-3s-1
J1s-14s-23s-9
K1s-5s-2s-2s-4s-5 175 175
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
FA 7a 23.4
KiCF2 7a 105.3
SaT03 7a 48.5

DB Program Definition E-Value

EST Name Species Strain