+Marker Data: AFRT03H01

Crop bunching_onion
Population FA
Linkage Group 4a
Marker Type SSR
Map Position 40.5
Annotation
Source Name AB795109
Source Type genomic
Source Sequence
Developer NIVTS
Document Wako et al. (2016)

motif (cg)5c(ac)8
PCR product (bp) 229
fwd primer AFRT03H01-U
fwd primer seq. acccatattttgcagcactcctgt
rev primer AFRT03H01-L
rev primer seq. gtttaagggggttgtggatcctagc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB795109
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 231 231
D1s-15s-10s-8 227 227
F1s-7s-17s-3s-1
J1s-14s-23s-9 229 229
K1s-5s-2s-2s-4s-5 229 229
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
FA 4a 40.5
KiCF2 4a 59.9

DB Program Definition E-Value

EST Name Species Strain