+Marker Data: AFAT06F09

Crop bunching_onion
Population SaT03
Linkage Group 7b
Marker Type SSR
Map Position 18.9
Annotation
Source Name AB564916
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (tg)3(ta)3tc(ta)3aacatgataggacatgcatgtgtatgt(ta)3(tg)3(ta)5(tg)4(ta)5tgttaggacatgcatgcgtatgt(ta)3tgtg(ta)4tgtatgcgtatgt(ta)3(tg)8tatatgttaggacatgcatgtgtatgt(ta)3tgtttatttgtaagtgcatatgt(ta)3
PCR product (bp) 238
fwd primer AFAT06F09-U
fwd primer seq. atctctgaaatcacccataaggcata
rev primer AFAT06F09-L
rev primer seq. gtttgcacttacaaataaacatatataacatacacatgc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564916
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 270 270
Cho1s-1s-2s-2s-8s 236 236
D1s-15s-10s-8 220 220
F1s-7s-17s-3s-1 270 270
J1s-14s-23s-9 234 234
K1s-5s-2s-2s-4s-5 234 234
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
SaT03 7b 18.9

DB Program Definition E-Value

EST Name Species Strain