+Marker Data: AFAA05H01

Crop bunching_onion
Population SaT03
Linkage Group 5b
Marker Type SSR
Map Position 156.1
Annotation
Source Name AB696897
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2012) Mol Breed 30:1689-1698

motif (ac)8tacacgcact(ca)3
PCR product (bp) 161
fwd primer AFAA05H01-U
fwd primer seq. agcctgctacacgtatacaccaaa
rev primer AFAA05H01-L
rev primer seq. gtttgtaatgggtgtgcgtgttctagt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB696897
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 221 221
D1s-15s-10s-8 163 163
F1s-7s-17s-3s-1
J1s-14s-23s-9 161 161
K1s-5s-2s-2s-4s-5 223 223
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
SaT03 5b 156.1

DB Program Definition E-Value

EST Name Species Strain