+Marker Data: AFAA04C09

Crop bunching_onion
Population SaT03
Linkage Group 5b
Marker Type SSR
Map Position 86.1
Annotation
Source Name AB564869
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ta)3t(ac)15atttc(tg)3
PCR product (bp) 174
fwd primer AFAA04C09-U
fwd primer seq. acaaagagcaagaagagaaagagacaga
rev primer AFAA04C09-L
rev primer seq. gtttggcttacataaacctgggctttta
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564869
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 164 164
F1s-7s-17s-3s-1
J1s-14s-23s-9 168 168
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
SaT03 5b 86.1

DB Program Definition E-Value

EST Name Species Strain