+Marker Data: ACE266

Crop bunching_onion
Population SaT03
Linkage Group 5b
Marker Type SSR
Map Position 83.0
Annotation
Source Name BQ580097
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (tg)6
PCR product (bp) 219
fwd primer ACE266(PL)-F
fwd primer seq. aggttcaacctctgaagtcttg
rev primer ACE266(PL)-R
rev primer seq. gtttaagttcacatgagcatcccac
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. BQ580097
annotation similar to UniRef100_Q2GEM2 Cluster: Dihydroorotate dehydrogenase; n=1; Neorickettsia sennetsu str. Miyayama|Rep:, partial (4%)
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 292 294
Cho1s-1s-2s-2s-8s 292 294
D1s-15s-10s-8 292 292
F1s-7s-17s-3s-1 292 294
J1s-14s-23s-9 292 292
K1s-5s-2s-2s-4s-5 294 294
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
SaT03 5b 83.0

DB Program Definition E-Value

EST Name Species Strain