+Marker Data: ACE241

Crop bunching_onion
Population SaT03
Linkage Group 5b
Marker Type SSR
Map Position 88.3
Annotation
Source Name CF446529
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ct)5cc(ct)4
PCR product (bp) 202
fwd primer ACE241(PL)-F
fwd primer seq. actctcttcttcgagctccctc
rev primer ACE241(PL)-R
rev primer seq. gtttccgttttccgacattattttct
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. CF446529
annotation similar to UniRef100_A5C7R5 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 387 387
Cho1s-1s-2s-2s-8s 387 387
D1s-15s-10s-8 383 383
F1s-7s-17s-3s-1 385 385
J1s-14s-23s-9 387 387
K1s-5s-2s-2s-4s-5 396 396
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
SaT03 5b 88.3

DB Program Definition E-Value

EST Name Species Strain