+Marker Data: AFRT02E01

Crop bunching_onion
Population SaT03
Linkage Group 1b
Marker Type SSR
Map Position 68.2
Annotation
Source Name AB565032
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ta)4(tg)11taaaa(ta)4acagata(tc)3
PCR product (bp) 172
fwd primer AFRT02E01-U
fwd primer seq. atcgatggacttgaatcgatgaat
rev primer AFRT02E01-L
rev primer seq. gtttgaacccctagcctccttgctctta
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB565032
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 177 177
F1s-7s-17s-3s-1
J1s-14s-23s-9 181 181
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
SaT03 1b 68.2

DB Program Definition E-Value

EST Name Species Strain